Streptomyces longhuiensis: LGI35_14220
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Entry
LGI35_14220 CDS
T09038
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03030
DNA replication
slon03430
Mismatch repair
slon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGI35_14220 (dnaE)
03430 Mismatch repair
LGI35_14220 (dnaE)
03440 Homologous recombination
LGI35_14220 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slon03032
]
LGI35_14220 (dnaE)
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_14220 (dnaE)
Enzymes [BR:
slon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGI35_14220 (dnaE)
DNA replication proteins [BR:
slon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGI35_14220 (dnaE)
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGI35_14220 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
UDL99347
LinkDB
All DBs
Position
complement(3035828..3039367)
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMSDHGNLHGAYDFFHTAKKS
GVVPIIGIEAYVAPESRRNKRKVQWGQPHQKRDDVSGSGGYTHKTIWASNSTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEALKSAAEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKTTDEMYAVDSSDAWQEGCANTLLVAEQIDTTGMFEKRD
LMPKFDIPEGFTEVTWFQEEVRVGMERRYPGGVPDDRQKQAEYEMDIIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPITHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLSGITDPAHPRYSEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHSDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKA
NKGIDLEMLSLPLDDPKTYEMLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHTNYAERKNGRQEITPIHPELEEPLKETLGLTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELEKNFVLFQAGAKKKGFSDAAIQALWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
EHNFAAQGDDVILFGLSAVRNVGTNVVESIIRSRKAKGKYASFPDYLDKVEAAACNKRTT
ESLIKAGAFDTMGHTRKGLTAQYEPMIDNVVQVKRKEAEGQFDLFGGMGEEDSSEPGFGL
DVEFSEDEWEKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIGQLTGGDYSDGSIV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMVPDLSNAGTNAPVTITIPTVKVTPPMVSRLGEILSHHKGNSEVRI
KLQGARKTTVLRLDRHRVQPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcaacgcctgcaatgaaatgggcatgacgcacatcgcc
atgtccgaccacggcaacctccacggggcgtacgacttcttccacacggcgaagaagtcc
ggtgtcgtcccgatcatcgggatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaaggtccagtggggccagccgcaccagaagcgggacgacgtgtccggttcgggtggt
tacacccacaagacgatctgggcgtcgaacagcacgggcctgcacaacctcttcaagctg
tcctcggacgcgtacgccgagggctggctgcagaagtggccgcgcatggacaaggagacg
atctcccagtggtcggaggggctcatcgcctcgaccggctgcccgtccggtgagctccag
acgcgcctgcgcctcggccagttcgacgaggccctgaagtcggccgccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagcgc
cgcgtccgcgacggacttctggagatcggcaagaagctcggcatcccgcccctggtgacg
aacgactcgcactacacgtacgcgcacgaggcgaccgcgcacgacgcgcttctctgcatc
cagaccggcaagaacctctcggacccagaccgcttccgcttcgacggcacgggctactac
ctcaagacgaccgacgagatgtacgccgtcgactcctcggacgcctggcaggagggctgc
gccaacacgctcctggtcgccgagcagatcgacaccacgggcatgttcgagaagcgcgac
ctgatgccgaagttcgacatcccggagggcttcacagaggtcacctggttccaggaggag
gtccgggtcggcatggagcgccgctacccgggcggcgtccccgacgaccggcagaagcag
gccgagtacgagatggacatcatcatccagatggggttcccggggtacttcctggtcgtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcacgcac
ggcctgatcttcgagcggttcctgaaccccgagcgcgtctccatgcccgatgtcgacatc
gacttcgacgagcgcaggcgcgtcgaagtgatcaggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggaaagatcaaggccaagaacgcgatcaaggac
tccgcgcgcgtcctcggctacccgtacgcgatgggcgaccgcctcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctgtcgggcatcaccgaccccgcccacccgcgc
tacagcgaggcgggcgagatccgggggatgtacgagaacgagccggacgtcaagaaggtg
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgccgccggc
gtcatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtccggcactcggac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gatttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaaggcc
aacaagggcatcgacctggagatgctctccctgccgctggacgaccccaagacgtacgag
atgctctgccgcggtgacacgctcggcgtgttccagttcgacggcggcccgatgcgttcg
ctgctgcgccagatgcagcccgacaacttcgaggacatttccgccgtctcggccctgtac
cggccgggcccgatgggaatgaactcgcacacgaactacgcggagcgcaagaacgggcgc
caggagatcaccccgatccacccggagctcgaagagccgctgaaggagaccctgggtctc
acctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgaggag
ctggagaagaacttcgtcctcttccaggccggagccaagaagaagggcttctccgacgcg
gcgatccaggccctgtgggacgtcctggtgccgttcgccggatacgcgttcaacaaggcg
cactcctccgcgtacggcctcgtcacctactggaccgcctacctcaaggcgaactacccg
gccgagtacatggccgcgctgctcacgtcggtgaaggacgacaaggacaagtccgcggtc
tatctgaacgaatgccggcgcatgggcatcaaggtcctcccgccgaatgtgaacgagtcg
gaacacaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgccgtccgt
aacgtcggtacgaacgtggtcgagtcgatcatccgcagccgcaaggcgaaggggaagtac
gcctccttccccgactacctcgacaaggtcgaggccgccgcctgcaacaagcgcaccacg
gaatcgctgatcaaggcaggcgcgttcgacacgatggggcacacccgcaagggcctcacc
gcacagtacgagccgatgatcgacaacgtcgtgcaggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgaggaggacagcagcgagccgggcttcgggctc
gacgtcgaattctccgaggacgagtgggagaagacctatctcctcgcccaggagcgcgag
atgctcggtctctacgtctccgaccacccgctgttcggcctcgaacacgtgctgtccgac
aaggccgacgccggcatcgggcagctcaccggcggcgactactcggacggctcgatcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgcgaccgtcgaggacctggccggctccatcgagtgcatgttcttcccggcaacg
tatcagctggtgtcgacccaactcgtcgaggacgccgtcgtgttcgtcaagggccgcctc
gacaagcgcgaggacgtgccgcgcctcgtcgcgatggaactcatggtccccgacctgtcg
aacgccgggaccaacgcgcccgtgacgatcaccatccccacggtgaaggtgaccccgccg
atggtcagcaggctcggcgagatcctcagccaccacaagggcaacagcgaggtgcggatc
aagctccaaggggcccgtaagacaacggtgctgcggctcgaccggcaccgtgtgcagccc
gaccccgcgctcttcggtgacctcaaggtgctgctcgggccgtcctgcctggcgggctga
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