Streptomyces longhuiensis: LGI35_16540
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Entry
LGI35_16540 CDS
T09038
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
slon
Streptomyces longhuiensis
Pathway
slon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGI35_16540 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_16540 (recO)
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LGI35_16540 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LGI35_16540 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
UDL99764
LinkDB
All DBs
Position
complement(3553099..3553848)
Genome browser
AA seq
249 aa
AA seq
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MSLFRDDGIVLRTQKLGEADRIITLLTRNHGRVRAVARGVRRTKSKFGARLEPFSHVDVQ
FFARGSELIGRGLPLCTQSETIAPYGGGIVSDYARYTAGTAMLETAERFTDHEGEPAVQQ
YLLLVGGLRTLSRGEHEPHLVLDAFLLRSLAVNGYAPSFGDCAKCGLPGPNRFFSVGAGG
SVCVDCRVPGSVVPSPQALVLLGALLTGDWETADACEARFVREGSGLVSAYLHWHLERGL
RSLRYVEKS
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcttccgcgacgacggcatcgtgctgcgcacccagaagctgggcgaggcggac
cgcatcatcacgctgctcacccgcaaccacgggcgcgtacgcgccgtggcccgtggtgtg
cggcgcaccaaatccaagttcggcgcccggctcgaaccgttctcgcacgtcgacgtgcag
ttcttcgcgcggggcagcgagctgatcgggcgcgggctgcccctgtgcacccagagcgag
accatcgccccctacggcggcggcatcgtcagcgactacgcccgctacaccgccggcacc
gccatgctggagaccgccgagcgcttcaccgaccacgagggcgagccggccgtccagcag
tacctgctcctggtgggcggactgcggaccctctccagaggcgagcacgaaccccacctc
gtcctcgacgccttcctgctgcgctccctcgccgtgaacggctacgccccgagtttcggc
gactgcgccaagtgcggcctcccgggccccaaccgcttcttctccgtcggcgcgggcggc
tcggtttgcgtcgactgccgggtaccgggcagcgtcgtaccctcaccgcaggccctcgtc
ctcctcggcgcgctgctgaccggcgactgggagacggcggacgcgtgcgaggcacgcttc
gtgagagagggcagcggactggtgtcggcgtatctgcactggcacctggagcgcggactg
cgctccctgcgttacgtagagaaaagctag
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integrated database retrieval system
