Streptomyces longhuiensis: LGI35_21435
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Entry
LGI35_21435 CDS
T09038
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGI35_21435 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slon03019
]
LGI35_21435 (groL)
03110 Chaperones and folding catalysts [BR:
slon03110
]
LGI35_21435 (groL)
03029 Mitochondrial biogenesis [BR:
slon03029
]
LGI35_21435 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slon04147
]
LGI35_21435 (groL)
Enzymes [BR:
slon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LGI35_21435 (groL)
Messenger RNA biogenesis [BR:
slon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LGI35_21435 (groL)
Chaperones and folding catalysts [BR:
slon03110
]
Heat shock proteins
HSP60 / Chaperonin
LGI35_21435 (groL)
Mitochondrial biogenesis [BR:
slon03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LGI35_21435 (groL)
Exosome [BR:
slon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LGI35_21435 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LGI35_21435 (groL)
Exosomal proteins of breast cancer cells
LGI35_21435 (groL)
Exosomal proteins of colorectal cancer cells
LGI35_21435 (groL)
Exosomal proteins of bladder cancer cells
LGI35_21435 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4844
CbiA
Motif
Other DBs
NCBI-ProteinID:
UDM00659
LinkDB
All DBs
Position
complement(4632670..4634295)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGANPMALKRGIE
KAVEAVSAALLEQAKDVETKEQIASTASISAADTQIGELIAEAMDKVGKEGVITVEESQT
FGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIVNSKIGNVKDLLPLLEKVMQ
SGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGTVIS
EEVGLKLENAGLDLLGRARKVVITKDETTIVDGAGDSDQVQGRVNQIRAEIENSDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
SAVFEKLELDGDEATGANAVKLALEAPLKQIAVNGGLEGGVVVEKVRNLPIGHGLNAATG
EYVDMIAEGILDPAKVTRSALQNAASIAALFLTTEAVIADKPEKAAAGGAPGGMPGGDMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaggaggcacggcgcggcctcgagcgcggcatgaac
cagctcgccgacgccgtcaaggtgaccctgggccccaagggtcgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggcgccgagctggtcaaggaggtcgcgaagaagacg
gacgacgtcgccggtgacggcacgacgaccgcgaccgtcctcgcccaggcgctcgtcaag
gaaggcctgcgcaacgtcgcggccggcgccaacccgatggccctcaagcgcggcatcgag
aaggccgtcgaggccgtctccgccgccctgctcgagcaggccaaggatgtcgagaccaag
gagcagatcgcttccacggcctccatctccgccgccgacacccagatcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgcagacc
ttcggtctcgagcttgagctcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgccaccgacatggagcgtatggaggcgtcgctcgacgacccgtacatcctcatc
gtcaactccaagatcggcaacgtgaaggacctccttccgctgctcgagaaggtcatgcag
tccggcaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctttcgaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggccatgctcggcgacatcgccatcctcaccggtggcaccgtcatctcc
gaggaggtcggcctcaagctggagaacgccggtctcgacctgctcggccgcgcccgcaag
gtcgtcatcaccaaggacgagacgacgatcgtcgacggcgccggtgacagcgaccaggtc
cagggccgcgtcaaccagatccgtgccgagatcgagaactcggacagcgactacgaccgc
gagaagctgcaggagcgcctggcgaagctcgccggcggtgttgcggtcatcaaggccggt
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggccctgctgcaggcc
tccgcggtcttcgagaagctcgagctcgacggtgacgaggcgaccggcgccaacgccgtg
aagctcgcgctggaggccccgctcaagcagatcgccgtcaacggtggtctcgagggtggc
gtcgtcgtggagaaggtccgcaaccttcccatcggccacggcctgaacgccgcgaccggc
gagtacgtcgacatgatcgccgagggcatcctcgacccggcgaaggtcacgcgttccgcg
ctgcagaacgccgcgtccatcgccgcgctgttcctcaccaccgaggccgtcatcgccgac
aagccggagaaggccgccgccggcggcgctccgggcggcatgccgggcggtgacatggac
ttctga
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integrated database retrieval system
