Streptomyces longhuiensis: LGI35_22230
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Entry
LGI35_22230 CDS
T09038
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
slon
Streptomyces longhuiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCBM
Sigma70_r2
zf-HC2
Sigma70_r4_2
PhyR_sigma2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
UDM00806
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Position
4797056..4799035
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AA seq
659 aa
AA seq
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MSVDGRDEPLESRGASGTETGGLPARQVPSQGGPLRDGAPDSAPSEPSVPTAPSAAPGEN
VSDPSVPQQREHGADAGTSALPPPREKPPGETLSADADLITRMRSGDDTAYEELYRRHST
AVRRYARTCCRDGHTADDLTAEVFARMLQAVRGGSGPEHAVRAYLLTTVRRVAAGWTKSA
KREHLVEDFAVFAQQAARSSEVSDDDTLDLGADVLAMHEAEQSMAMQAFRSLPERWQAVL
WHTEVEDESPSEVATLFGLDANGTRVLAKRAREGLKEAYLQAHVSTTLTQDEECARYADR
LGAYARGSLRTRAERGLRKHLEECAKCRLAAGQIKEVASGIPGVVPVAVIGWFGAAGYAK
VVALIGGGAAGAAGAGAAAAAGGGSGGAAGGGAAASEGLGAPVKAGIAAGVVAAGVAVAV
AIALAGDPQKPKPEAHKEKPAVSQPIAPPKPTPPPKPKPKPKPEPPAAQPTPPPEPAPKP
TPTPKPAPKPTPEPTPPPRPTPEPTPKPTPPPPPAPAVYQLNQLSYGGIGDGTKPEIRPG
ESSWVWQRYGLRVADKQYANGVTVHAHSSVTIDLNRSCTAYDAFAGVDDMTLGTGAVRFS
VYADGVRLWKSQVLRGGDPAVPVHVNLAGRKAIRLVTEPRTAFDSLAVGDWAESRFTCR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgacgggcgggacgagccactcgagagcaggggtgcgagcggcaccgagacc
ggtgggctgcccgcgcggcaggtgccgagccagggcggtccactccgggacggggcaccg
gactccgctccgtccgagccctcggtccccacggccccctccgcggccccgggcgagaac
gtctccgacccgagcgtgccgcagcagcgggagcacggtgcggacgcgggaacctccgcc
ctgccgcccccgcgggaaaagcctccgggggaaacgctttcggcggacgccgacctgatc
acccgtatgcggtccggcgacgacaccgcgtacgaggagctgtaccgcaggcactcgacc
gccgtccgccgttacgcacgcacctgctgccgggacgggcacaccgccgacgacctcacg
gccgaggtgttcgcgcgcatgctccaggccgtgcgcggcggcagcgggcccgagcacgcg
gtgcgcgcctatctgctgaccactgtgcgccgcgtcgccgcgggctggacgaagtcggcg
aagcgcgagcacctggtcgaggacttcgcggtgttcgcccagcaggccgcccgctccagc
gaggtctccgacgacgacacgctggatctcggcgccgacgtcctcgcgatgcacgaggcc
gagcagtccatggccatgcaggccttccggtccctgcccgagcgctggcaggccgtcctg
tggcacacggaggtcgaggacgagtcgcccagcgaggtcgccacgctcttcgggctcgac
gccaacggcacgcgcgtgctggccaagcgcgcccgcgagggcctcaaggaggcgtacctc
caggcccatgtgagcaccaccctcacccaggacgaggagtgcgcgcgctacgccgaccgg
ctcggcgcgtacgcccgcggcagcctgcgcacccgggccgaacgcggtctgcgcaagcac
ttggaggagtgcgccaagtgccgtctcgccgccggtcagatcaaggaagtcgccagcggg
atcccgggtgtcgtgccggtcgcggtcatcggctggttcggtgccgccgggtacgcgaag
gtggtcgcgctcatcgggggcggcgccgcgggtgcggcgggcgccggtgcggcggccgcg
gcgggcggcggctccggaggggccgcgggcggtggcgccgcggcgtccgaggggctcggc
gcgcccgtgaaggcgggcatcgcggccggcgtggtcgcggccggcgtggccgtggcagtg
gcgatcgccctcgcgggcgacccgcagaaacccaagccggaggcgcacaaggagaagcct
gcggtctcgcagcccatcgccccgccgaagcccacgcctcccccgaagccgaagccgaag
ccgaaacccgagccgccggccgcgcagccgacgcctccccccgagcccgcgccgaagccg
acccccaccccgaagccggcgccgaagcccacgcccgagccgacgccgcctccgaggccg
acacccgagcccaccccgaagcccacgcctcccccgccgcccgccccggccgtctaccag
ctgaatcagctgtcgtacggcgggatcggcgacggcaccaagccggagatccggccgggc
gagagcagctgggtgtggcagcgctacggcctgcgcgtcgcggacaagcagtacgcgaac
ggggtcaccgtccacgcgcactcctccgtgaccatcgacctcaaccgcagctgcaccgcg
tacgacgccttcgccggtgtcgacgacatgacgctcggcacgggagcggtgcggttctcc
gtgtacgcggacggggtgcggctgtggaagtcgcaggtcctcaggggtggggacccggcc
gttcccgttcatgtgaatctcgcgggacgcaaggcgatccggctggtcacggagccgcgg
acggccttcgactccctcgcggtcggggactgggcggagtcccgtttcacctgccggtga
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