Streptomyces longhuiensis: LGI35_22475
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Entry
LGI35_22475 CDS
T09038
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03030
DNA replication
slon03430
Mismatch repair
slon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGI35_22475
03430 Mismatch repair
LGI35_22475
03440 Homologous recombination
LGI35_22475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slon03032
]
LGI35_22475
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_22475
Enzymes [BR:
slon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGI35_22475
DNA replication proteins [BR:
slon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGI35_22475
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGI35_22475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_14
AAA_30
zf-CXXC
AAA_16
AAA_18
AAA_5
AAA_19
nSTAND3
Mg_chelatase
AAA_28
TsaE
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UDM00844
LinkDB
All DBs
Position
complement(4854504..4856765)
Genome browser
AA seq
753 aa
AA seq
DB search
MSSLALYRRYRPESFAEVIGQEHVTDPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEQGPTPTPCGECQSCRDLARNGPGSIDVIEIDAASHGGVDDARDLREKAFFGPASS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLGEVCGKEDIPVAEGVLPLVVRAGAGSVRDSMSVMDQLLAAAAEDGVTYAMA
TSLLGYTDGSLLDSVVEAFASGDGAAAFEVVDRVIEGGNDPRRFVADLLERLRDLVILAA
VPDAAEKGLIDAPVDVVERMQAQAGVFGGAELSRAADLVNEGLTEMRGATSPRLQLELIC
ARVLLPAAYDDARSVMARLDRLERGGHFVPAGQGSGPAMGYVPAPDAHPGAAAQVPAGGG
PAAARAAVRGPGPGGESAPAPAAPAPTPAPAPTPAPAPAAQAAPAPQVSAPPAVPAEPAP
AAPPAGAAPGAWPTAAPAGGGRRPGGWPTAAPSGGGAGGGAGGGQPSAAAPTPPPAQPQP
QAPAQPPAAAPPAAGGLDPRSLWPNILEVVKNKRRFTWILLSQNAQVTGFDGTTLQLGFL
NAGARDNFASSGSEDVLRTALAEQFGVHWKVEAVVDPSGGGGGGGQAPPPAPGGGYPGHG
GGGAPAAPASPRPPAPQAQAPAAPRPPDRSAPQASAPAPAPAPRPAAQEPPPVSIEDDIP
ADDDPDLDESVLSGHDLIVRELGATVVEEFTNE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtctctcgcgctctaccgccgctatcgcccggagtcgttcgccgaggtcatcggg
caggaacatgtgaccgacccgctgcagcaggcgctgcggaacaaccgggtcaatcacgcg
tacctgttcagtggcccgcgcggctgcggcaagacgacgagcgcgcgcatcctcgcgcgg
tgtctgaactgcgagcaggggcccacgccgacgccgtgcggcgagtgccagtcgtgccgc
gacctggcgaggaacggtccgggttcgatcgacgtcatcgagatcgacgcggcttcgcac
ggtggtgtcgacgacgcccgtgacctgcgcgaaaaggccttcttcgggcccgcgagcagc
cgctacaagatctacatcatcgacgaggcccacatggtcacgtcggcggggttcaacgcc
cttctgaaggtcgtcgaggagcccccggagcacctcaagttcatcttcgccaccaccgag
cccgagaaggtcatcgggacgatccggtcgcgtacgcaccactaccccttccgcctcgtg
ccgcccgggacgctccgggactacctcggagaggtctgcggcaaggaggacatccccgtc
gcggagggtgtgctgccgctggtggtgcgcgccggcgccggttccgtgcgtgactccatg
tccgtcatggaccagctgctcgccgccgcggccgaggacggtgtgacgtatgccatggcg
acgtccctcctcggctacacggacggttcgctcctcgactccgtcgtggaggccttcgcc
tcgggtgacggcgcggccgccttcgaggtcgtcgaccgcgtcatcgaggggggcaacgac
ccgcgccggttcgtcgccgacctcctggagcggctgcgggacctggtgatcctggccgcc
gtcccggacgcggccgagaagggcctcatcgacgcccccgtggacgtcgtcgagcggatg
caggcccaggccggagtcttcggcggcgccgaactcagccgcgccgccgacctggtcaac
gaggggctcacggagatgcggggcgccacctcgccccgcctccagctcgagctgatctgc
gcgcgcgtgctgctgcccgccgcgtacgacgacgcccgctccgtgatggccaggctcgac
cgcctggagcgcggcggccacttcgtacccgcgggacagggctccggtcctgccatgggg
tacgtgcccgcgcccgacgcccaccccggtgcggccgcgcaggtccccgcgggcggcggt
cccgccgctgccagggcggcggtgcgagggcccggaccgggcggtgagagcgcgcccgcg
cctgctgctccggcgcccactcccgctccggcgcccactcctgccccggctcccgccgct
caggccgcgcccgctccgcaggtgtccgcgccgcccgccgttcccgccgaacccgcgccc
gcggcgccgcccgccggggccgcacccggcgcatggcccaccgccgccccggccggtggc
ggcaggcgccccggcgggtggcccacggccgcgcccagcggcggaggcgctggtggaggc
gccggcggaggccagccctccgccgcggcgcccacgccgcctcccgcccagccccagccg
caggcacccgctcagccccccgccgcggcaccgcccgccgccggtgggctcgacccgcgc
agcctgtggccgaacatcctcgaagtggtcaagaacaagcgccgtttcacctggatcctg
ctcagccagaacgcgcaggtgaccggcttcgacggcacgacgctccagctcgggttcctg
aacgccggagcccgggacaacttcgcgagcagcggcagtgaagacgtcctgcggacggcg
ctggccgagcagttcggcgtccactggaaggtcgaggcggtcgtcgacccctcgggcggc
ggcggtggtggcggccaggcaccgcctcccgccccgggcggcggctatccgggccacggc
ggcggtggcgctcccgcggccccggcctctccgcgcccgccggccccgcaggcccaggcc
ccggccgcgccgagacccccggaccggtccgcgccgcaggcgtccgccccggctccggcc
cccgcgccgagaccggccgctcaggagccgcccccggtctccatcgaggacgacatcccg
gcggacgacgaccccgacctcgacgagtcggtcctgtccggccacgacctgatcgtccgc
gagctcggcgcgacggtcgtcgaggagttcacgaacgagtag
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