Streptomyces longhuiensis: LGI35_22610
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Entry
LGI35_22610 CDS
T09038
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slon03021
]
LGI35_22610
Transcription machinery [BR:
slon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGI35_22610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
UDM00868
LinkDB
All DBs
Position
4874768..4875628
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AA seq
286 aa
AA seq
DB search
MSADQGSSKVLTLSKSASAPDVLHSSPVSGASEAIDTRTLSRSLFLRLAALDENSPERAY
VRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFDCERGVEFPTFAMPT
VVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELAQKLDRSPTVPELAAVLGVSEDDV
VDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYRESLKPLLAKLPPRE
RRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLSQLREGLIAD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctcacgctcagcaagagcgcatccgcgccc
gacgtgcttcacagctcgcctgtatccggggcttccgaagccatcgacacccgcaccctg
tcccgctccctcttcctgcggctcgccgcactcgacgagaacagccccgagcgtgcctac
gtgcgggacaccctcatcgagctgaacctcccgctggtccggtacgcggcggcgcgcttc
cgcagccgtaacgaaccgatggaggacatcgtccaggtcggcacgatcggcctgatcaag
gcgatcgaccggttcgactgcgaacgcggcgtggaattcccgacgttcgcgatgccgacc
gtcgtcggcgagatcaagcgcttcttccgcgacacgtcctggtcggtgcgggtgccgcgc
cggctccaggagctgcggctcgcgctgaccaaggcgagcgacgagctggcccagaagctg
gaccgctcgccgaccgtacccgagctggccgcggtgctcggcgtctccgaggacgacgtg
gtcgacggactcgcggtgggcaacgcctacaccgcctcctccctcgactccccggcgccc
gaggacgacggcggcgagggctccctcgcggaccgcctcggctacgaggacacggccctg
gagggcgtggagtaccgcgagtcgctcaagccgctgctcgccaagctcccgccgcgcgag
cgccgcatcatcatgctgcgcttcttcgcgaacatgacgcagtcgcagatcggcgaggag
gtcggcatctcacagatgcacgtgtcgcgcctgctcacgcggaccctgtcgcagctcagg
gaaggcctgatcgccgactga
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