Streptomyces longhuiensis: LGI35_23160
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Entry
LGI35_23160 CDS
T09038
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGI35_23160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slon03019
]
LGI35_23160
Enzymes [BR:
slon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LGI35_23160
Messenger RNA biogenesis [BR:
slon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LGI35_23160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
UDM00963
LinkDB
All DBs
Position
complement(4992607..4994058)
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AA seq
483 aa
AA seq
DB search
MPNANEDNPSALSQVQRRAVSELLRVAPVADDLARRFQEAGFSLALVGGSVRDALLGRLG
NDLDFTTDARPEDVLKIVRPWADAVWEVGIAFGTVGCQKDGYQVEVTTYRSEAYDRTSRK
PEVSYGDSIEEDLVRRDFTVNAMAVALPEKEFIDPHGGLEDLAERVLRTPGTPEESFSDD
PLRMMRAARFAAQLDFEVAPEVVKAMKDMADRIDIVSAERVRDELNKLILSAHPREGLTL
LVDTGLAGHVLPELPELRLERDEHHRHKDVYDHTLIVLEQAMALESDGPDLVLRLSALLH
DIGKPRTRRFEDDGRVSFHHHEVVGAKMTKKRMTALKYSNELVKDVSRLVELHLRFHGYG
TGEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKANALGRAYDGLEERIARLKEQE
ELDSIRPDLDGNQIQEILGIKPGPAIGQAYKFLLELRLENGPMEHDAAVAALKEWWAAQQ
NAE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaatgaagacaatcccagtgccctgagccaggtgcagcgccgcgcggtg
agcgagctgctgcgggtggcccctgtcgccgatgacctcgcccgtcgattccaggaggcc
gggttctcgctcgccctggtcggtggctcggtcagggacgcgcttctcggccggctcggc
aacgatctggacttcaccacggacgcgcgtcccgaagatgtgctcaagatcgtcaggcct
tgggcggatgccgtgtgggaggtcgggatcgccttcgggacggtcggctgccagaaggac
ggctaccaggtcgaggtcaccacgtaccgctccgaggcgtacgacaggacctcgcgcaag
ccggaggtctcgtacggcgactccatcgaggaagacctcgtgcgtcgcgacttcacggtg
aacgcgatggccgtggccctgccggagaaggagttcatcgacccgcacggcgggctcgaa
gaccttgccgagcgcgtgctgcgtacccctggaacccctgaggagtccttctccgacgat
ccgctgcggatgatgcgggccgcacgcttcgccgcgcagctggacttcgaggtggccccc
gaggtcgtcaaggccatgaaggacatggccgaccgcatcgacatcgtctccgcggagcgg
gtgcgggacgagctgaacaagctgatcctctctgcgcacccgcgcgagggcctcaccctc
ctcgtggacacgggcctcgccggccatgtcctgcccgagctgcccgagctgcgccttgag
cgggacgagcaccaccggcacaaggacgtctacgaccacacgctgatcgtcctcgagcag
gcgatggcgctggagtcggacggcccggatctcgtgctccgtctctcggccctgctgcac
gacatcggcaagccgaggacgcggcgcttcgaggacgacggccgggtctccttccaccac
cacgaggtggtgggcgccaagatgacgaagaagcgcatgacggcgctgaagtactcgaac
gagctcgtgaaggatgtctcccgcctggtcgagctgcacctgcgcttccacggatacggc
accggcgagtggaccgactccgcggtccgccgctacgtccgtgacgcgggtccgttgttg
gaccgcctgcacaagctgacccgctccgactgcacgacgcgcaacaagcggaaggccaat
gcgctggggcgggcgtacgacggtctggaagagcgcatcgcgcggctcaaggagcaggag
gagctggactcgatccgtcccgacctcgacggcaatcagatccaggagatcctcggcatc
aagccagggccggcgatcgggcaggcgtacaagttcctgctggaactgcggcttgagaac
gggccgatggagcatgacgcggctgtggcggcgctcaaggaatggtgggcggcgcagcag
aacgccgagtga
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integrated database retrieval system
