Streptomyces longhuiensis: LGI35_25935
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Entry
LGI35_25935 CDS
T09038
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGI35_25935 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slon03019
]
LGI35_25935 (recQ)
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_25935 (recQ)
Enzymes [BR:
slon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGI35_25935 (recQ)
Messenger RNA biogenesis [BR:
slon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGI35_25935 (recQ)
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGI35_25935 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
SaeA_1st
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
UDM01463
LinkDB
All DBs
Position
5595407..5597386
Genome browser
AA seq
659 aa
AA seq
DB search
MSEVTEPGVATAMRGGALETLHRVFGYDAFRGEQEAIIDHVVDGGDAVVLMPTGGGKSLC
YQIPALVRAGTGVVISPLIALMQDQVDALRALGVRAGFMNSTQDFDERRTVEAEFLAGEL
DVIYLAPERLRLDSTLDLLSRGRISVFAIDEAHCVAQWGHDFRPDYLALSVLGRRWPDVP
RIALTATATHATHQEITQRLGMPDAKHFVASFDRPNIQYRIVPKADPKKQLLTFLKQEHE
GDAGIVYCLSRKSVEATAEFLSRNGIEAVPYHAGLDAGTRAAHQSRFLREEGLVVCATIA
FGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLASTAWMAYGLQDVVQQRKLINMG
EGDEAFRRRAGSHLDAMLALCETAQCRRSQLLMYFGQEPQTASCGNCDTCLSPPETWDGT
VAAQKILSTVVRLDRERRQKFGAGQVIDILMGRRTAKVIQFDHDQLSVFGIGEDLSEAEW
RGVVRQLLAQGLIAVEGEYGTLVLTEDSGSVLGRQREVRLRKEAPRPATSRSASRDRKAK
SPAADLPEQLLPVFEALRAWRGAQAKENGVPAYVIFHDATLKEIALQHPTSIGQLGTIGG
VGEKKLATWGEGVLEVLAGLDGAGSAGPSPTGGAATEAAAPEEHWPEHEPEPEPDDIDW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgacggagcccggcgtggcgacggcgatgcgcggcggcgcgctggagacg
ctgcaccgcgtcttcggatatgacgcgttccgcggtgagcaggaagcgatcatcgaccac
gtcgtggacggcggggacgccgtcgtcctgatgccgaccggcggcggaaagtccctgtgc
taccagatcccggccctggtcagagcgggtacgggagtcgtgatctcccccctcatcgcc
ctcatgcaggaccaggtggacgcgctgcgcgcgctcggcgtccgcgccggcttcatgaac
tcgacgcaggacttcgacgagcggcgcaccgtcgaggccgagttcctcgcgggcgagctg
gacgtcatctacctggcgccggagcggctgcgcctcgactccacgctcgacctgctctcc
cgcggcaggatctccgtcttcgcgatcgacgaggcgcactgtgtggcgcagtgggggcac
gacttccgcccggactacctggccctgtccgtcctcggccggcgctggccggacgtgccg
cgcatcgcgctcacggcgaccgcgacgcacgccacgcaccaggagatcacccagcgtctg
ggcatgccggacgcaaagcacttcgtggcgagcttcgaccggcccaacatccagtaccgg
atcgtgccgaaggccgacccgaagaagcagctcctcaccttcctcaagcaggagcacgag
ggcgacgcgggcatcgtgtactgcctgtcgcgcaagtcggtggaggcgaccgccgagttc
ctcagccggaacggcatcgaggcggtcccgtaccacgcgggtctcgacgcgggcacccgc
gcggcgcaccagtcccgcttcctgcgcgaggagggcctggtcgtctgcgcgaccatcgcg
ttcggcatgggtatcgacaagcccgacgtccggttcgtcgcacatctcgatctcccgaag
tccgtcgagggctactaccaggagacgggccgcgccggacgtgacgggctcgcgtccacg
gcctggatggcgtacgggctgcaggacgtcgtccagcagcggaagctgatcaatatgggg
gagggggacgaggcgttccggcgccgggcggggtcccacctcgacgcgatgctggcgctg
tgcgagacggcgcagtgccgcaggtcccagctgctcatgtacttcgggcaggagccgcag
acggccagttgcggcaactgcgacacgtgcctctcgccgccggagacctgggacggcacc
gtcgccgcgcagaagatcctttccacggtggtgcgcctcgaccgggagcgcaggcagaag
ttcggcgcgggccaggtcatcgacatcctgatgggccggcgcacggccaaggtcatccag
ttcgaccacgaccagctctccgtcttcggcatcggcgaggacctgagcgaggccgaatgg
cgcggcgtggtgcggcagttgctggcgcaggggctcatcgcggtcgagggtgagtacggg
acgctggtgctcaccgaggacagcgggagcgtcctcgggcggcagcgggaggtgcggctg
cgcaaggaggcgccgcggcccgccacgtcccgctcggcctcgcgcgaccgcaaggcgaag
tcgcccgcggcggacctgccggagcagctgctgcccgtcttcgaggcgctgcgcgcgtgg
cgcggcgcgcaggcgaaggagaacggggtcccggcgtacgtcatcttccacgacgcgacg
ctcaaggagatcgccctccagcaccccacgtccatcggccagttgggcacgatcggcggc
gtcggcgagaagaagctggcgacatggggcgagggtgtcctcgaggtcctggcgggcctg
gacggcgccggttccgccggcccgtcgccgaccggcggcgccgccacggaggcggcggcg
ccggaggagcactggccggagcacgagccggagccggaacccgacgacatcgactggtga
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integrated database retrieval system
