Streptomyces longhuiensis: LGI35_26890
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Entry
LGI35_26890 CDS
T09038
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03420
Nucleotide excision repair
slon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGI35_26890 (pcrA)
03430 Mismatch repair
LGI35_26890 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_26890 (pcrA)
Enzymes [BR:
slon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGI35_26890 (pcrA)
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGI35_26890 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
LGI35_26890 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
AAA_12
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
UDM01639
LinkDB
All DBs
Position
5794956..5797466
Genome browser
AA seq
836 aa
AA seq
DB search
MSSLFDDSFLADLTASKAGEEHAPPPPEDDTAPEHMPDDLFDGKFDAPPARDAYYRDGAP
RPALDPAALLDGLNENQKAAVVHGGSPLLIVAGAGSGKTRVLTHRIAYLLGERGVHPGQI
LAITFTNKAAGEMKERVESLVGPRANAMWVSTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKKFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYHRRFRHVLVDEYQDTNHAQYALVREL
VGTVDSGRAEDEPPREGDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYTDATTILL
EQNYRSTQTILSAANAVIERNESRRPKNLWTNAGAGAQITGYVADTEHDEAQFVADEIDR
LTDARDAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVL
ANPEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALRRVDEAYGMAARSTNAV
KRFNTLMEDLRTIVESGAGPATVLEAVLERTGYLAELQSSTDPQDETRIENLQELAAVAL
EFEQESASADGAAEGEGEASVGTLSEFLERVALVADSDQIPDEEDDGSGVITLMTLHTAK
GLEFPVVFLTGMEDGVFPHMRSLGQVKELEEERRLAYVGITRARERLYLTRSTLRSAWGQ
PSYNPPSRFLEEIPDAHLEWKRTGAMAPAKSTGPTSGIAASLSSSRSRSTPAFATRRATE
KPVVALSVGDRVTHDQFGLGTVVGVKGTGSNAEATVDFGEPKPKRLLLRYAPVEKL
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctcacggcttcgaaggccggtgag
gagcatgccccgccgccgcccgaggacgacacggctccggagcacatgccggacgacctg
ttcgacgggaagttcgacgcgcccccggccagggacgcgtactaccgggacggtgccccg
cgcccggcgctcgacccggcggctctcctcgacgggctgaacgagaaccagaaggcggcc
gtcgtccacggcggctccccgctgctcatcgtggcgggcgcgggttccggcaagacccgc
gtgctcacgcaccgcatcgcgtacctcctcggcgagcgcggcgtgcaccccggccagatc
ctcgcgatcacgttcacgaacaaggccgcgggcgagatgaaggagcgcgtcgagtccctc
gtcggcccgcgggcgaacgcgatgtgggtgtcgacgttccacagcgcctgcgtgcgcatc
ctgcgccgcgagtcgaagaagctcggcttcacgtcgtcgttctcgatctacgacgccgcc
gactccaagcgcctcatggccctggtctgccgcgacctcgacctggacccgaagaagttc
ccgccgaagtccttcagcgccaagatctcgaacctgaagaacgagctgatcgacgaggag
gacttcgcggcccaggccgccgacggcttcgagaagaccctcgcccaggcctacgcgatg
taccagtcccgcctccgtgaggcgaacgcgctggacttcgacgacctgatcatgacgacg
gtgaacctcctgcgcgccttcccggatgtcgccgagcactaccaccgccgcttccgccac
gtcctggtcgacgagtaccaggacacgaaccacgcgcagtacgcgctggtcagggagctg
gtggggacagtcgacagcggccgcgcggaggacgagccgccgcgtgagggcgacctcccg
ccggccgagctctgcgtcgtgggtgacgccgaccagtcgatctacgcgttccgcggagcc
accatccgcaacatcctccagttcgaggaggactacaccgacgcgacgacgatcctgctc
gagcagaactaccgctcgacgcagaccatcctctccgcggccaacgcggtcatcgagcgc
aacgaatcccgccgccccaagaatctgtggacgaacgcgggcgcgggcgcgcagatcacc
ggatacgtcgcggacaccgagcacgacgaggcgcagttcgtcgccgatgagatcgaccgg
ctcacggacgcgcgcgacgcgaaggccggcgacgtcgccgtgttctaccggacgaacgcg
cagtcccgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaaggtcgtcggc
ggagtccgcttctacgagcgcaaggaggtcagggatgtcctggcctatctgcgggtgctc
gccaaccccgaggactccgtccccctgcgccgcattctcaatgtgccgaagcgcggcatc
ggcgaccgcgccgaggcgatgatcgacgcgctctcccagcgcgagaagatctccttcccg
caggcgctgcgccgcgtcgacgaggcgtacggcatggcggcccgctcgacgaacgcggtg
aagcggttcaacacgctgatggaggacctccgcacgatcgtcgaatcgggcgcgggcccg
gccacggtcctggaagccgtactcgaacggaccggctatctggcggagttgcagtcgtcg
acggacccgcaggacgagacccggatcgagaaccttcaggaactcgcggccgtggccctg
gagttcgagcaggagagcgcgtcggcggacggcgcggccgagggtgagggcgaggcgagc
gtcggtacgctctccgagttcctggagcgggtcgcgctcgtcgccgactccgaccagatc
ccggacgaggaggacgacggctccggcgtcatcacgctgatgacgctgcacaccgccaag
ggcctcgagttcccggtcgtcttcctgaccggcatggaggacggtgtcttcccgcacatg
cgctccctcggccaggtcaaggagctggaggaggagcgccggctcgcctacgtcggcatc
acgcgcgcgcgtgagcgcctgtatctgacgcgctccacgctgcgcagcgcctggggccag
ccctcgtacaacccgccgtcgcgcttcctggaggagatcccggacgcgcatctggagtgg
aagcggacgggcgccatggcgcccgccaagtcgacgggaccgacgagcggcatcgccgcg
tccctctcgtcgtcgcgctcgcgctcgacaccggcgttcgccacccgccgggcgacggag
aagcccgtcgtcgcgctctcggtgggagaccgggtcacgcacgaccagttcggcctcggc
acggtcgtcggcgtcaagggcacgggctcgaacgcggaggcgacggtcgacttcggcgag
cccaagccgaagcgcctgctgctgcggtacgcgccggtggagaagctgtag
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