Streptomyces longhuiensis: LGI35_28645
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Entry
LGI35_28645 CDS
T09038
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03420
Nucleotide excision repair
slon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGI35_28645
03430 Mismatch repair
LGI35_28645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_28645
Enzymes [BR:
slon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGI35_28645
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGI35_28645
MMR (mismatch excision repair)
Other MMR factors
LGI35_28645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UDM01954
LinkDB
All DBs
Position
6190746..6194480
Genome browser
AA seq
1244 aa
AA seq
DB search
MTTRLTDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDAIDPDNPPGEPVISTYHAFAGRLL
TDHGLRIGLEPTARLLADATRFQLAARVLREAPGPYPALTRSFADLVSDLLTLDGELAEH
LVRPDELRAYDTRLLHTLEGRKLTNADLRKVPEAAAARLDLTGLVTRYREAKRARDLLDF
GDQIALSATLARTRPEVGAILRDEFRVVLLDEYQDTSVAQRILLAGLFGAGTGHPVTAVG
DPCQAIYGWRGASVANLDDFPEHFADTDGRPATRFSLSENRRSGGRLLELANGLAQPLRA
LHAGVEALRPAPGAERDGIVRCALLRTHAEEIDWLGDSLAHLVRTGTAPGEIAVLCRTAT
DFAAIQGALVARDIPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRI
GPRDLALLGRRARLLVAHARGGDDDPDRRLAEAVEGVDPSEVISLADALDTFLETPLDEP
GDDRLPFSPEARVRFARLATELRDLRRSLADPLMDVLHRVLAVTGLEVELAASPHALAAR
RRETLSNFLDIAASFAANDSSATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKS
KGLEWDVVAVPGLVTGTFPSAQGREKWTAQSKVLPHELRGDAATLPDIEAWDSKGMKAFH
EEMKEHQRTEELRLGYVTYTRPRTLLLGSGHWWGPAQKRPRGPSDFLQALYDHCAAGHGE
IEAWADEPEEDEENPALQEASAEHAWPLPLDDEAMARRRAAAATVLAHLETPADADAHAQ
ETGHPATYTDPDWPAPPDEEAFYEDEPLYGDEPFHGDEPLYEEGDFVSSPEDGPGPDWDE
WDDWDALPHERPRLPHPTGTPADEQSAADAPHNNDAHPRPHPDDARPMRGAPHTPPHPLG
AIPHPTTPQDADTRPHPDRAPTGTAPTVPPERHRPTPEETRTLASWDRDLDALTGELLRS
RQAVRDVPLPTTLTASQLLRLAADPDGFAQDLARPMPRPPQPAARRGTRFHAWVESRFEE
LRLPMLDPEELPGSEADIADERDLEALKEAFDSTPYAHRTPHRVETPFQLAIAGRVIRGR
IDAVYKEGEGDDTTYEIVDWKTTRGRTADPLQLAVYRLAWAEQHGLAPEAVKATFVYVRD
RETVTPRDLPGRAELERLLLEDPTPGPGDRRAPEPPDEHAPADG
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacacgcctcaccgatcccgagcagctcaaagagctcctcgggatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
ggctccggcaagacgacggtcatggccgcccgcgtcgtatggctcgtcggaaccggccag
gtcgccccggaacaggtcctcggcctcaccttcaccaacaaggccgccggcgaactcgcc
gagcgcgtccgcaaggcactgatcaaggcaggcgtcaccgaccccgacgccatcgacccg
gacaaccccccgggcgagcccgtgatctccacgtaccacgccttcgccggccgcctcctc
accgaccacggcctgcgcatcggcctcgaacccaccgcacgcctcctcgccgacgccacc
cgcttccagctcgccgcccgcgtcctgcgcgaggcccccggcccctacccggccctcacc
cgctccttcgccgacctcgtcagcgacctcctcaccctcgacggcgagctcgccgaacac
ctcgtccggcccgacgaactgcgcgcctacgacacccgcctcctgcacaccctcgaaggc
cgcaaactcaccaacgccgacctgcgcaaggtccccgaggccgccgccgctcgcctcgac
ctcaccggcctcgtcacccggtaccgcgaagccaagcgcgcccgcgacctcctcgacttc
ggcgaccagatcgccctctccgccaccctcgcccgtacccgccccgaggtcggcgccatc
ctccgcgacgagttccgcgtcgtcctcctcgacgagtaccaggacacctccgtcgcccag
cggatcctcctggccggcctcttcggcgcgggcaccggccaccccgtgaccgccgtcggc
gacccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctcgacgacttc
cccgaacacttcgccgacaccgacggtcgccccgccacccgcttctccctcagcgagaac
cgccgcagcggcggccgcctcctggaactcgccaacggcctcgcccagccgctgcgcgca
ctccacgcgggcgtggaagccctgcgccccgcccccggcgccgaacgcgacggcatcgtc
cgctgcgccctcctgcgcacccacgccgaggagatcgactggctcggcgactccctcgcc
cacctcgtacgcaccggcaccgcccccggcgagatcgccgtgctgtgccgcaccgcgacc
gacttcgccgccatccagggcgccctcgtcgcacgcgacatccccgtagaggtcgtcggc
ctctccggcctcctccacctccccgaggtcgccgacctcgtcgccgtctgcgaagtcctc
caggaccccggcgccaacgcctcactggtccgcctcctgaccggcccccgctggcgcatc
ggcccccgcgacctcgccctcctcggccgccgcgcccgcctcctcgtcgcccacgcgcgc
gggggcgacgacgaccccgaccgccgtctcgccgaagccgtcgagggggtcgacccctcc
gaagtgatatcgctcgccgacgccctcgacacgttcctggagacccccctcgacgaaccg
ggcgacgacaggctgcccttctcacccgaggcacgcgtacgcttcgcgcgcctcgccacc
gagctgcgcgacctgcgccgctcactcgccgacccgctgatggacgtactccaccgcgtc
ctcgccgtcaccggcctcgaagtcgaactcgccgcctcaccgcacgccctggccgcccga
cgccgcgaaaccctctccaacttcctcgacatcgccgcctccttcgccgcgaacgacagc
tccgcgaccctcctcgccttcctcggcttcctgcgcaccgccgcccagtacgaaaagggc
ctcgacaacgcgctgcccggcggcgagaacaccgtgaaggtgctcaccgcccacaagtcc
aagggcctggaatgggacgtcgtcgccgtccccggcctcgtcaccgggacgttccccagc
gcccagggccgcgagaaatggaccgcccagagcaaggtccttccgcacgaactgcgcggc
gacgccgccacactgcccgacatcgaagcgtgggactccaagggcatgaaggccttccac
gaagagatgaaggaacaccagcgcaccgaggaactccgcctcggatacgtcacgtacacc
cgcccccgcaccctcctcctcggctcgggccactggtggggccccgcccagaagcgcccc
cgcggcccctccgacttcctccaggcgctgtacgaccactgcgccgccggacacggggag
atcgaggcctgggccgacgaaccggaggaggacgaggagaaccccgcgctccaggaggcc
tccgccgagcacgcgtggccgctcccgctcgacgacgaggccatggcgcgccgccgcgcg
gccgcggccacggtgctggcccacctcgaaaccccggccgacgccgacgcccacgcccag
gagacgggccacccggccacgtacaccgacccggactggccggccccgccggacgaagag
gccttctacgaagacgagcccctctacggagacgagcccttccacggagacgagcctctt
tatgaagagggcgatttcgtcagctcaccggaggacggccccggaccggactgggacgag
tgggacgactgggacgcgctgccgcacgaacgccccaggctcccgcacccgaccggcacc
cccgcggacgagcagtccgcggccgatgcgccgcacaacaacgacgcgcacccgcgccca
cacccggacgacgcccgacccatgcgtggcgccccgcacacgcccccgcatcccctgggc
gccatcccgcaccccaccacgccccaggacgccgacacccgcccccatcccgaccgcgca
cccaccggcacagcccccaccgtccccccggagcgccaccggccaactccggaggagacc
cgcacactcgcctcctgggaccgcgacctcgacgccctcaccggcgaactcctgcgctcc
cgccaggctgtccgagacgtcccccttcccaccacactcaccgcctcccagctcctgcgc
ctggccgccgaccccgacggcttcgcacaggacctggcccgccccatgccccgcccgccc
cagcccgccgcccgccgcggcacccgcttccacgcctgggtcgaatcccgcttcgaagag
ctccgcctgcccatgctcgaccccgaagagctccccggcagcgaggccgacatcgccgac
gaacgcgacctcgaagccctcaaggaagccttcgacagcacgccctacgcccaccgcacc
ccccaccgcgtcgaaacgcccttccagctcgccatcgccggccgcgtcatccgcggccgc
atcgacgccgtctacaaagaaggcgaaggcgacgacaccacgtacgagatcgtcgactgg
aagaccacccgcggccgcaccgccgaccccctccagctcgccgtctaccgactcgcctgg
gccgagcagcacggcctcgcgcccgaggccgtcaaggcgacgttcgtctacgtacgcgac
cgcgaaaccgtcaccccccgcgacctgcccggacgcgccgaactggaacgcctcctcctc
gaagaccccacccccggccccggcgaccggagagcaccggaaccaccggacgagcacgcc
ccggcggacggatag
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