Streptomyces longhuiensis: LGI35_28665
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Entry
LGI35_28665 CDS
T09038
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03420
Nucleotide excision repair
slon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGI35_28665
03430 Mismatch repair
LGI35_28665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_28665
Enzymes [BR:
slon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LGI35_28665
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGI35_28665
MMR (mismatch excision repair)
Other MMR factors
LGI35_28665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Zn_ribbon_TiaS
C1_1
DUF6011
Motif
Other DBs
NCBI-ProteinID:
UDM01958
LinkDB
All DBs
Position
6197636..6199855
Genome browser
AA seq
739 aa
AA seq
DB search
MTAATHSTLFPQVPDTADAVLDGLDPEQRAVATALHGPVCVLAGAGTGKTRAITHRIAYG
VRSGILQPNSILAVTFTNRAAGEMRGRLRHLGAGGVQARTFHAAALRQLQFFWPKAVGGE
LPRIVDRKIQLVADAAAACRIRLERGELRDVTAEIEWSKVTQTVPADYAAAAAKTGRLTP
RNNAETAQIYAAYETLKRDRTLIDFEDVLLLTVGILQDRHDIADQVRSQYQHFVVDEYQD
VSPLQQRLLELWLGDRDNLCVVGDASQTIYSFTGATPDHLLNFRTRHPNATVVKLVRDYR
STPQVVHLANTLLSHARGRAAEHRLELISQRDRGPEPAYTDYADEPTEAEGTARRIRALI
DNGVSAGEIAILFRTNGQSEIYEQALADAGIPYQLRGAERFFERAEVRKAGHALRSAARF
GNNDSLLDEAVDLPSQVRAVLSGEGWTSQPPDGSGAVRERWESLAALVRLAEDFARAKPT
ATLTDLVTELDERAAAQHAPTVEGVTLASLHAAKGLEWDAVFLVGLAEGMMPITYAKTDE
QIEEERRLLYVGVTRARHHLSLSWALSRSPGGRPNRRPSRFLDGIRPGTSGATARTTSTG
QGGIEHGTPTTPRTTTGPVRRRTPRTVARCHVCGRTLTDAGEMKLMRCEDCPSDMDEGLY
ERLRDWRADQAQQLGQPAFCVFTDKTLVAIAEAMPEDAAQLARIPGVGMRKLNRFGTDVL
TICAGGAPDTGVGGVDEDD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgacagcagcaacgcactccaccctcttcccgcaggttccggacacggccgacgcggtg
ctcgacgggctcgaccccgaacagcgcgccgtcgccaccgccctgcacggaccggtgtgc
gtcctcgccggcgcgggcacaggcaagacccgcgccatcacccaccgcatcgcctatggc
gtccgctccggcatcctccagcccaacagcatcctcgccgtcaccttcaccaaccgcgca
gcaggcgaaatgcgcggccgcctccgccatctcggcgccggcggagtccaggcccgcacc
ttccacgccgcggccctgcgccagctccagttcttctggccgaaagcagtcggcggcgag
ctgccccgcatcgtcgaccgcaagatccaactcgtcgccgacgcggccgccgcctgccgc
atccgcctcgagcgcggcgagctccgcgacgtcacggccgaaatcgagtggtccaaagtc
acccagaccgtccccgccgactacgccgcagcagccgccaaaaccggacgcctcaccccc
cgcaacaacgccgagaccgcccagatctacgccgcctacgaaacgctcaagcgcgaccgc
accctcatcgacttcgaagacgtcctcctgctcaccgtcggcatcctccaggaccgccac
gacatcgccgaccaggtccgctcccagtaccagcacttcgtggtcgacgaataccaggac
gtcagccccctccaacagcgactcctcgaactctggctcggcgaccgcgacaacctctgc
gtcgtcggcgacgccagccagaccatctactccttcaccggcgccacccccgaccacctc
ctcaacttccgcacccgccaccccaacgccaccgtcgtcaaactcgtccgcgactaccgc
tccaccccccaggtagtccacctcgccaacaccctcctctcccacgcccgaggccgcgcc
gccgaacaccgcctcgaactcatctcccaacgggaccgaggaccagaacccgcctacacg
gactacgccgacgaaccgaccgaagccgaaggcaccgcccgccgcatccgcgccctcatc
gacaacggcgtctccgccggcgagatcgccatcctgttccgcaccaacggacagtccgag
atctacgagcaagccctcgccgacgccggcatcccctaccagctccgcggcgcggaacgc
ttcttcgaacgcgcggaagtacgcaaagccggccacgccctccgcagcgccgcccgcttc
ggaaacaacgactccctcctcgacgaagccgtcgacctcccctcccaggtccgcgccgtc
ctctccggcgaaggctggaccagccaaccccccgacggctccggagccgtccgcgaacgc
tgggaatccctcgccgccctcgtacgcctcgccgaggacttcgcccgcgccaaacccacc
gccaccctcaccgacctcgtcaccgaactcgacgaacgcgcagccgcccagcacgcaccc
accgtcgaaggcgtcaccctggcctccctgcacgccgccaagggcctcgaatgggacgcc
gtcttcctcgtcggcctcgccgaaggcatgatgccgatcacgtacgccaagaccgacgaa
cagatcgaggaagaacgccgcctcctctacgtcggcgtcacccgggcccgccaccacctc
agcctgtcctgggccctctcccgctcacccggcggccgccccaaccgccgccccagccgc
ttcctcgacggcatccggccaggcacctcaggagccacggcccgcaccacgagcaccgga
caaggcggcatcgaacacggcacgccgacgacgccccgcaccaccaccggacccgtccga
cgccgcaccccccgaaccgtcgcccgctgccacgtctgcggacgcaccctcaccgacgcc
ggcgagatgaaactcatgcgctgcgaggactgcccctccgacatggacgagggcctctac
gagcgactccgcgactggcgcgccgaccaggcacaacagctcggacagcccgccttctgc
gtcttcaccgacaagaccctcgtcgccatcgccgaagccatgcccgaggacgcggcccaa
ctcgcccggatccccggcgtcggcatgcgcaagctcaaccggttcggcaccgacgtgctc
accatctgcgcaggtggggccccagatacgggcgttggaggagtcgacgaggacgactga
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