Streptomyces longhuiensis: LGI35_28980
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Entry
LGI35_28980 CDS
T09038
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slon03021
]
LGI35_28980
Transcription machinery [BR:
slon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGI35_28980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
PF0610-like_N
Sigma70_ECF
DUF7343
MarR_2
HTH_24
IF2_N
HTH_3
HTH_Crp_2
NirdL-like_HTH
MarR
GerE
HTH_ParB
HTH_AraC
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UDM02015
LinkDB
All DBs
Position
complement(6262248..6263294)
Genome browser
AA seq
348 aa
AA seq
DB search
MTNGDGPVRDEKHGTQDLPADGGDGMRRLADGIPEQQARPHPEDPADLERPGPPAVADAS
EQAEPAGGEKISAGPDARRAGWMSEHERHGDQQRTHDPRDRSGARLMFIELRTLKDGSPE
YADLRNQLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYA
TPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQLHGRSPTVHELAEKLAISE
EEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGSEDEALEGVEYRESLKPLLEDLPPR
EKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacggggacgggccggtgcgggacgagaagcacggcacacaggacctcccggcc
gacggcggggacgggatgcggcggctcgccgacggcatccccgaacagcaggcccggccg
cacccggaggaccccgcggacctcgaacggccgggtccgccggcggtggccgatgcgtcg
gagcaggcagagccggccggcggggagaagatctccgcaggaccggacgcgcgacgggcg
ggatggatgagcgagcacgagcgacacggtgaccagcagcgcacgcacgatccgcgggac
cgcagcggcgcacggctgatgttcatcgagctgcgcaccctgaaggacggcagcccggag
tacgcggacctgcgcaatcagctggtccgcatgcatctgccgctcgtcgagcacctggcc
cgccgcttccgcaaccgtggcgagccgctcgacgacctgacccaggtcgccacgatcggc
ctgatcaagtcggtggaccgcttcgacccggagcgcggagtggagttctccacgtacgcg
acgccgacggtggtcggtgagatcaagcggcacttccgcgacaagggctgggcggtgcgc
gtcccgcggcgccttcaggagctgcgtctcgcgctgacgacggcgacggccgagctgtcc
cagctgcacggccgctcccccacggtccacgagctcgccgagaagctggcgatctcggag
gaggaggtcctggagggcctggagtcggccaacgcgtactccacgctgtccctggacgtc
ccggacacggacgacgagtcgcctgcggtggcggacacgctgggatccgaggacgaggcg
ctggagggcgtcgagtaccgcgagtccctcaagccgctcctggaggacctgccgccgcgt
gagaagcggatcctgcttcttcgcttcttcgggaacatgacgcagtcgcagatcgcgcag
gaggtcggcatctcccagatgcacgtctcgcgcctgctggcccgcaccctggcccagctg
cgcgagaagctcctcgtcgaggagtga
DBGET
integrated database retrieval system
