Streptomyces longhuiensis: LGI35_30515
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Entry
LGI35_30515 CDS
T09038
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slon03032
]
LGI35_30515
03036 Chromosome and associated proteins [BR:
slon03036
]
LGI35_30515
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_30515
DNA replication proteins [BR:
slon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LGI35_30515
Chromosome and associated proteins [BR:
slon03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LGI35_30515
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LGI35_30515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
UDM02291
LinkDB
All DBs
Position
6612931..6613596
Genome browser
AA seq
221 aa
AA seq
DB search
MNKAQLVEAIADKVGGRQQAADAVDAVLDAIVRAVVSGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVAGSKKLPKNDVAVKKAPKGSLTGGASATVKKA
AAKKATTAKKATAKKVTAKKVTAKKTTAKKTTATAKKATAKKTTATAKKAAAKKAAPAKT
AAKKATAKKTAPAKKATAKKAPAKKSTARKTTAKKTTARKK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtcggcggccgtcagcaggcc
gcggacgccgtcgacgcggtcctggacgccatcgtccgtgccgtcgtcagcggggaccgg
gtctcggtcaccggcttcggctcgttcgagaaggtcgaccgcccggcccgctacgcccgt
aacccgcagacgggtgagcgcgtacgggtcaagaagacctccgttccgcgtttccgtgcc
ggtcagggcttcaaggacctcgtcgcgggctcgaagaagctcccgaagaacgacgtggcc
gtgaagaaggcgcccaagggcagcctgaccggcggtgcttcggcgaccgtcaagaaggcc
gcggccaagaaggccacgaccgccaagaaggcgaccgcgaagaaggtcaccgccaagaag
gtcaccgccaagaagacgacggcgaagaagaccacggcgacggcgaagaaggccaccgcc
aagaagaccaccgccacggcgaagaaggccgccgccaagaaggccgccccggcgaagacc
gccgcgaagaaggccacggcgaagaagacggcgcccgccaagaaggccacggccaagaag
gcgcccgccaagaagtccactgcgcgcaagacgaccgccaagaagaccaccgcccgcaag
aagtaa
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