Streptomyces longhuiensis: LGI35_31410
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Entry
LGI35_31410 CDS
T09038
Name
(GenBank) HAMP domain-containing protein
Organism
slon
Streptomyces longhuiensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
T4SS
DUF4795
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
UDM02457
LinkDB
All DBs
Position
6816264..6821774
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AA seq
1836 aa
AA seq
DB search
MESGAASRGTNTRAKGGQSLAKQRKPRNGTTAVDTAALNRLLAGLVAMRDGNFRKRLTVS
GDGLMAEIAAVFNEVADRNLHLTGELSRVRRMVGREGKLTERLETGACEGSWAAAINASN
ALVDDLVRPVSEVGRVLTAVAEGDLSPRMELRSQVPDGNGHPLRGEFLKVGRTVNNLVDQ
LSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTT
AVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAQVP
GVAGVWKDLTDSVNLMAGNLTAQVRGIAQVTTAVANGDLSQKVTVSARGEVAQLAETINQ
MTETLRTFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDIA
TVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGSEVTRVAREIGVEGELGGQ
AHVQGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSSFADQVTRMARDVGTEGRLGGQARVDGVSGTWKELTDSVNFMAGNLTSQV
RQIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSAFADQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKIDVDARGEIL
ELKNTLNTMVDQLSNFAEQVTRVSREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANNL
TLQVRNIAEVTTAVARGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVG
TEGQLGGQARVRGVTGIWKDLSDNVNLMANNLTSQVRNISQVAAAVANGDLTKKVTVEAR
GEVAQLADTVNTMVTTLSSFADQVTRVAREVGTDGILGGQARVPGVSGTWKDLTESVNGM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEQVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIAAVATAVTRGDLNLKID
VDAAGEIQVLQDNINKMISNLRDTTIANEEQDWLKGNLARISGLMQGRRDLEDVASLIMS
ELTPVVSAQHGAFFLALPTDEAEAGSAPEDAYELRMLGSYGYSMGSMPTSFRPGETLIGT
AAQEKRAILVENVPQGYLKIASGLGEAPPAHVIVLPVLFEGTVLGVIELATFQPFTQIQK
DFLNQIAEMIATSVNTISVNTKTEVLLKQSQELTEQLRERSAELENRQKALQESNAELED
KAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLLI
LAKLLADNADSNLTPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALVQ
LVDYVEATFRPLTAEKGLDFSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGAVE
LVIRPAGADVPDAIREQLLEAGSLREADGDLIAFSVTDTGIGIAASKMRVIFEAFKQADG
TTSRKYGGTGLGLSISREIARLLGGEIHAQSEPGRGSTFTLYMPLHASELPPQGYPQLAP
TIEPGMHAVPMEVMPPEASMPPEVRSYQDTQHGPAALFRRRRRQVAAPEQRPALPGQPGQ
QVPPAPAQERAQEQWAGTGQEGAPQERRTFLFGGEKVLIVDDDIRNVFALTSVLEQHGLS
VLYAENGREGIEVLEQHDDVTVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAM
KGDREKAIESGASDYVTKPVDPDHLLTVMEQWMRGE
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgtcgcgaggcacgaatacgcgcgcaaagggcggacagtccctg
gcgaaacagcgtaaaccgcgcaatgggaccacagcggtggacaccgctgccctgaacaga
ctgctcgccggtcttgtggcgatgcgggacggcaacttccgcaagcgcctcacggtgtcg
ggcgacggcctcatggccgagatcgcggcggtcttcaacgaggtcgcggaccggaatctg
cacctcaccggcgagctgtcgcgggtgcggcggatggtcgggcgggagggaaagctcacc
gagcggctggagacgggcgcctgtgagggctcctgggctgcggcgatcaatgcctcgaac
gccctggtggacgacctcgtacgcccggtctccgaggtcggacgggtgctcacggcggtc
gcggagggcgatctgtcgccgcgcatggagctgcgttcgcaggtgccggacggcaacggt
catcctctgcggggcgagttcctcaaggtcgggcgcaccgtcaacaacctggtggaccag
ctgtcgacgttcaccgacgaggtcacgcgggtggccagtgaggtgggcaccgagggcaag
ctgggcggtcaggcccgggtgcgcggtatgtccggttcgtggaaggatctcacggattcg
gtcaacaccatggcgtaccggctgaccgctcaggtgcgtgacattgctctcgtgacgacc
gcggtggccaagggtgatctgtcccggaaggtcacggttcacgtcgcgggcgagatgctc
gagctgaagaacaccgtcaacacgatggtggaccagctgtcgtccttctcctccgaggtg
acccgcgtggcccgcgaggtcggcacggagggcgagctcggcggccaggcgcaggtgcct
ggtgtggcgggtgtgtggaaggacctcaccgattccgtaaatcttatggccggcaacctg
acggcccaggtgcgcgggatcgcgcaggtcacgacggcggtcgccaacggtgatctgtcg
cagaaggtgacggtgtcggcacgcggcgaggtcgcccaactcgccgagaccatcaatcag
atgaccgagacgctgcgcacgttcgccgacgaggtcacgcgtgtggccaacgaggtcggt
gccgaagggcagctcggcgggcaggcgaacgtgccgggtgcggccgggacgtggaaggac
ctcaccgattcggtgaacacggtcttccggaacctgaccacgcaggtgcgcgacatcgcg
accgtcacgacggcggtggcgaacggtgatctctcgcagaaggtgaccgtcgacgtcgcc
ggcgagatgctcgagttgaagaacaccgtcaacacgatggtggaccagctgtccgcgttc
ggctccgaagtcacccgcgtggcgcgggagatcggtgtcgagggtgagctgggcggccag
gcgcatgtgcagggcgcggccggtacgtggaaggacctgacggactccgtcaacacggcc
ttccgcaacctgacgggccaggtccgcaacatcgcgcaggtgacgacggcggtggccaac
ggcgacctgtcgcagaaggtcaccgtggacgtgtccggcgagatgctccagctgaagaac
accgtgaacacgatggtggaccagctgtcctccttcgccgaccaggtgacgcgcatggcg
cgtgacgtgggcacggagggccggctcggcggtcaggcgcgggtcgacggcgtgtccggc
acctggaaggaactcaccgactccgtcaacttcatggcggggaacctgacttcgcaggtg
cgccagatcgcgcaggtgaccacggcggtggcgcgcggtgacctgtcgcagaagatcgac
gtggacgcgcgcggcgagatcctcgaactcaagaacaccatcaacacgatggtcgaccag
ctctccgcgttcgccgaccaggtgacgcgggtggcccgcgaggtgggtacggaaggccgg
ctcggcggtcaggcgcaggtgcccggcgtcgccggtgtgtggcgcgacctgaccgactcc
gtgaacggcatggccggcaacctcaccgcccaggtgcgcaacatcgcgcaggtcgccacg
gcggtggcacggggtgacctgtcgcagaagatcgacgtggacgcgcgcggcgagatcctg
gagctgaagaacaccctcaacacgatggtggaccagctctcgaacttcgccgagcaggtc
acgcgggtctcccgcgaggtgggtacggagggcatcctcggcggccaggccgaggtccag
ggcgtctccggcacctggaaggacctcacgcagtccgtgaacggcatggccaacaacctg
acccttcaggtgcgcaacatcgccgaggtcaccacggcagtcgcccgcggcgacctgtcc
aagaagatcaccgtcgacgcgaagggcgagatcctcgaactcgtcacgaccgtgaacacg
atggtggaccagctgtcgtcgttcgccgagcaggtgacccgcgtggcccgcgaggtgggt
acggagggccagctgggcggccaggcgcgcgtgcggggcgtcacgggcatctggaaggac
ctcagcgacaacgtcaacctgatggccaacaacctgaccagccaggtgcgcaacatctcg
caggtcgcggcggccgtcgccaacggcgacctcaccaagaaggtcaccgtcgaggcgcgc
ggagaggtcgcgcagctcgccgacacggtcaacaccatggtgacgacgctgagttcgttc
gccgaccaggtgacccgcgtggcccgcgaggtgggcaccgacggcatcctcggcgggcag
gcccgcgtaccgggagtctccggtacgtggaaggacctcaccgagtccgtgaacggcatg
gcgtcgaacctcaccggacaggtccgcaacatcgcgatggtcacgaccgccatcgccaag
ggcgacctgaccaagaagatcgacatcgacgcccggggcgagatcctcgaactcaagacg
accatcaacacgatggtcgaccagttgtcctcgttcgccgagcaggtgacccgggtcgcc
cgtgaggtgggtacggagggccagctgggcggccaggcccgcgtgcgcgacgtcgacggc
acctggcgcgacctgaccgagtccgtgaacgagatggccgggaacctgacccgtcaggtg
cgcgccatcgcggccgtcgccacggcggtgacccgcggcgacctgaacctcaagatcgac
gtcgacgcggcgggcgagatccaggtcctccaggacaacatcaacaagatgatctccaac
ctgcgcgacaccacgatcgccaacgaggagcaggactggctgaagggcaacctggcccgt
atctccggcctcatgcagggccgccgcgacctggaggacgtggcctcgctgatcatgagc
gagctgacgccggtcgtctccgcccagcacggcgcgttcttcctggcgctgccgacggac
gaggccgaggccggttccgcgcccgaggacgcgtacgagctgcgcatgctcggcagttac
ggctactcgatggggtccatgccgacctcgttccggcccggtgagacgctcatcgggacg
gcggcccaggagaagcgcgcgatcctcgtggagaacgtgccgcagggttatctgaagatc
gcttccgggctcggggaggcgccgcccgcacacgtcatcgtgctgccggtgctcttcgag
gggacggtcctcggtgtgatcgaactggcgacgttccagccgttcacgcagatccagaag
gacttcctgaaccagatcgccgagatgatcgcgacgagcgtgaacaccatctccgtcaac
acgaagacggaggtgctgctcaagcagtcgcaggagctcaccgagcaactgcgcgagcgg
tcggcggagttggagaaccggcagaaggcgctccaggagtccaacgcggagctggaggac
aaggcggagctgctcgcccagcagaaccgcgacatcgaggtcaagaacacggagatcgaa
gaggccaggcaggtcctggaggagcgcgccgagcagctcgcggtctccatgcggtacaag
tccgagttcctggcgaacatgtcgcacgagctgcgtacgccgctcaactccctgctgatt
ctggccaagttgctcgccgacaacgcggactcgaacctgaccccgaagcaggtcgagttc
gccgagacgatccatggtgccggttccgacctgctccagttgatcaacgacatcctcgac
ctgtccaaggtcgaggcgggcaagatggacgtgtcgccgacccgcatcgctctggtgcag
ctcgtcgactacgtggaggccaccttccgcccgctgaccgcggagaagggcctcgatttc
tccgtacgggtctcgcccgaactgcccgcgacgctccacacggacgaacagcgcctgctc
caggtgctgcgcaacctgctgtccaacgcggtgaagttcaccgactccggagccgtcgaa
ctggtcatcaggccggcgggcgcggacgtgcccgacgccatccgtgagcagctcctggag
gcgggctccctgcgggaggcggacggcgacctgatcgccttctccgtgaccgacaccggt
atcggcatcgcggccagcaagatgcgggtgatcttcgaggcgttcaagcaggccgacggg
acgacgagccgcaagtacggcggtacgggcctcggcctgtccatcagccgtgagatcgcg
cggctgctcggcggtgagatccacgcgcagagcgagcccgggcgtggctccacgttcacg
ctgtacatgccgctgcacgcgagcgaactgccgccgcagggctacccgcagctcgcgccc
accatcgagccgggtatgcacgcagtgccgatggaggtcatgccgcccgaggcgtcgatg
ccgccggaggtcaggtcgtaccaggacacccagcacggtcccgccgcgctcttcaggcgg
cgccgcaggcaggtggccgcgcccgaacagcggccggcgctgccgggacagcccgggcag
caggtgccgccggcgcccgcgcaggagcgtgcccaggagcaatgggcgggcaccggtcag
gaaggggcgccgcaggagcgacgcacgttcctcttcggtggcgagaaggtgctcatcgtc
gacgacgacatccgtaacgtcttcgcgctcaccagcgtcctggagcagcacggcctgtcc
gtgctgtacgccgagaacggccgggaggggatcgaggtcctcgaacagcacgacgacgtg
acggtcgtcctgatggacatcatgatgccggagatggacggctacgcgacgacgacggcg
atccgcaggatgccgcagttcgccgggctgccgatcatcgcgctcacggcgaaggccatg
aagggcgacagggagaaggccatcgagtccggggcctccgactacgtcacgaagccggtc
gatccggatcatctgctgacggtgatggagcagtggatgcgcggggagtga
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