Streptomyces longhuiensis: LGI35_31430
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Entry
LGI35_31430 CDS
T09038
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slon03009
]
LGI35_31430 (rimO)
Enzymes [BR:
slon01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LGI35_31430 (rimO)
Ribosome biogenesis [BR:
slon03009
]
Prokaryotic type
ribosomal protein modification factors
LGI35_31430 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
DUF3079
Motif
Other DBs
NCBI-ProteinID:
UDM02461
LinkDB
All DBs
Position
6826852..6828312
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AA seq
486 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWELVEDAEAADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKDLAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAERQDAGAEVALPGHAPVDLPEGLAPASGPRAPLRRRLG
SNPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVSENNT
SYGKDLGDIRLLETLLPELAAVDGIERVRVSYLQPAEMRPGLIDVLTGTDKVVPYFDLSF
QHSAPAVLRSMRRFGDTDRFLDLLSTIRDRAPQAGVRSNFIVGFPGESEADLAELERFLT
GARLDAIGVFGYSDEEGTEAATYEHKLDEDVVAERLARVSRLAEELVSQRADERVGEAVH
VLVESIDDEDGAVGRGEHQAPETDGQVLLTSSEGLSVGRIVEAKVIGTQGVDLVAEPLEC
SEEAGR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggaggcggacggctgggagctcgtcgaggacgccgag
gccgcagacgtcgctgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtcgacgcccttctcgaagccaatgacctcaagggccatggcagaacccaggccgtcgtg
gccgtcggctgcatggccgagcgctacggcaaggatctggcggaagccctccccgaggcc
gacggcgtgctcggcttcgacgactacgccgacatctccgaccggctccagaccatcctc
aacggcggcatccacgcctcgcacaccccgcgcgaccggcgcaagctgctgccgatcagc
cctgccgagcggcaggacgcgggcgccgaggtggcgctccccggacacgcccccgtggac
ctgcccgagggtctcgcgcccgcgtccggcccccgtgccccgctgcgccgccgcctcgga
tccaaccccgtcgcctcggtgaagctggcgtccggctgcgaccgccgctgctcgttctgc
gccatcccgtccttccgcggctccttcatctcgcgccggcccagcgacgtcctcggtgag
acgcgctggctcgccgagcagggcgtcaaggaggtcatgctcgtctcggagaacaacacc
tcgtacggcaaggacctcggcgacatccgactcctggagacgctgctgcccgagctggcc
gccgtcgacgggatcgagcgggtgcgcgtcagctatctgcagcccgccgagatgcgcccc
ggcctcatcgacgtcctcacgggcaccgacaaggtcgttccctacttcgatctctcgttc
cagcactcggcgcccgccgtgctgcggtccatgcggcgcttcggtgacaccgaccgcttc
ctcgatctgctctccacgatccgcgacagggcgccgcaggccggtgtccggtcgaacttc
atcgtcggcttccccggcgagagcgaggccgacctggccgagctggagcgattcctcacc
ggcgcccgtctcgacgcgatcggcgtcttcggctactccgacgaggagggcacggaagcg
gcgacgtacgagcacaagctcgacgaggacgtcgtcgccgagcgcctcgcgcgggtgtcg
cggctcgccgaggagctggtctcgcagcgcgcggacgagcgcgtcggcgaggcggttcac
gtgctcgtcgagtccatcgacgacgaggacggtgccgtcgggcgcggagagcaccaggct
cccgagacggacggacaggtgctgctcaccagcagcgagggcctcagcgtgggtcgtatc
gtcgaggcaaaggtgatcggcacccagggcgtcgacctggtcgccgagccgctcgagtgt
tctgaggaggcgggcagatga
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