Streptomyces longhuiensis: LGI35_31460
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Entry
LGI35_31460 CDS
T09038
Name
(GenBank) DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LGI35_31460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_31460
Enzymes [BR:
slon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LGI35_31460
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LGI35_31460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UDM02466
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All DBs
Position
complement(6831714..6832547)
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AA seq
277 aa
AA seq
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MPEGDTVLQTARRLHTALAGQVLIRSDLRVPRFATADLTGRTVLDVTPRGKHLLTRIEGG
LTLHSHLRMDGSWKVYAPGERWTGGPGHQIRAVLGNATRTAVGYRLPVLELLRTADENKV
VGHLGPDLLGPDWDAVTALRNLLRDPARPLGEALLDQRNLAGIGNVYKSELCFLLQVTPW
LPVGDLPDTTAARLPELAKKLLEANRDRPARVTTGSGRPGQRLYVYGRAPRPCLRCRTPI
RVADQGDGSRERPTYWCPSCQHGPTPRPYVKQPPPTR
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggagacaccgtcctgcagaccgcgcggcgtctgcacaccgccctcgcgggc
caggtgctcatccgctccgacctgcgcgtcccccgcttcgccacggccgacctgaccggc
cgcaccgtcttggacgtcaccccgcgtggcaagcacctgctcacccgcatcgagggcggc
ctcaccctgcactcgcacctccgcatggacgggtcctggaaggtgtacgcaccgggcgag
cggtggaccggtggccccggccaccagatccgcgcggtcctcggcaacgccacccgcacc
gccgtgggctaccgcctccccgtcctcgaactcctgcgcacggccgacgagaacaaggtg
gtcggtcacctcggacccgacctgctcggcccggactgggacgccgtcaccgccctccgc
aacctcctccgcgacccggcccgcccccttggcgaggcgctcctcgaccagcgcaatctc
gcgggcatcggcaacgtctacaagtccgaactgtgcttcctcctccaggtcaccccctgg
ctgcctgtcggcgacctccccgacaccaccgccgcccgcctccccgagctcgccaagaag
ctcctcgaagccaatcgcgaccgccccgcgcgcgtcaccaccggcagcggccgccccggc
cagcggctctacgtctacggacgggcgccccgcccctgcctgcgctgccgcaccccgatc
cgcgtggcggaccagggcgacggctcccgcgaacgacccacctactggtgcccctcctgc
caacacggcccgaccccgcgcccgtacgtcaagcagcccccgcccaccagatga
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