Streptomyces longhuiensis: LGI35_31700
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Entry
LGI35_31700 CDS
T09038
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon00523
Polyketide sugar unit biosynthesis
slon01100
Metabolic pathways
slon01110
Biosynthesis of secondary metabolites
slon01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LGI35_31700 (rfbH)
Enzymes [BR:
slon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
LGI35_31700 (rfbH)
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Motif
Pfam:
DegT_DnrJ_EryC1
Beta_elim_lyase
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
UDM02513
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Position
6882670..6883974
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AA seq
434 aa
AA seq
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MSDHKALVLDAVRAYHRAAGSAEPFTPGVTEIWPSGAVLEEEDRLGLVEAALEMRIAAGP
SSRRFESSFAKKLKRRKAHLVNSGSSANLLAVSALTSHLLEDRRLRPGDEVITVAAGFPT
TVNPILQNGLVPVFVDIELGTYNTTVERVAEAIGPRTRAIIIAHTLGNPYAVAELAELAT
QHDLFLIEDNCDAVGATYDGRPTGTFGDLSTVSFYPAHHLAMGEGGCVLTSNLVLARVVE
SLRDWGRDCWCEPGVSDTCLKRFKYQLGTLPAGYDHKYIYSHVGYNLKATDLQAALGLTQ
LDKLDRFVEARRRNWRRLREGLDGLPHLILPEATPRSDPSWFGFVLTVDPEAPFGAAELV
AFLEERKIGTRRLFAGNLTRHPAYANQPHRVVGELTNSDIVTLGSFWVGVYPGLTDEMLD
YVISSVKEFIAARP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcacaaggcattggtcctggacgcggtgcgggcataccaccgggcagccggc
tcggccgagccgttcacgcccggtgtgacggagatctggccgtccggcgcggtgctcgag
gaggaggaccggctggggctggtcgaggccgcgctggagatgcggatcgcggcgggcccg
agctcacgcaggttcgagtcgtcgttcgccaagaagctgaaacgccgcaaggcgcacctg
gtgaactccgggtcctccgcgaatctcctggcggtctcggcgctgacctcgcacctcctg
gaggaccgccggctccggcccggcgacgaggtgatcaccgtggccgcgggcttccccacc
acggtgaacccgatcctgcagaacggcctggtcccggtcttcgtcgacatcgagctcggc
acgtacaacacgacagtggagcgggtggccgaggccataggtccccggacccgcgcgatc
atcatcgcccacaccctggggaatccctacgccgtcgcggaactcgccgaactggccacc
cagcacgacctgttcctgatcgaggacaactgcgacgcggtcggcgccacctatgacgga
aggcccacgggcaccttcggtgacctgtccaccgtcagcttctaccccgcgcatcacctc
gcgatgggggagggcggctgcgtcctcacctccaacctggtgctggcccgggtggtggag
tcgctgcgtgactggggccgtgactgctggtgcgagcccggggtgagcgacacctgcctc
aagcgattcaagtaccagctgggcacgctgcccgccggctacgaccacaagtacatctac
tcccacgtcggctacaacctcaaggccaccgacctgcaggcggcgctcgggctcactcag
ctcgacaagctggaccgcttcgtggaagcgcgccggcgcaactggcgacggctgcgcgaa
gggctggacgggcttccgcacctgatccttcccgaggccacgccgcgcagtgacccgagc
tggttcggcttcgtgctcaccgtcgatcccgaggcgcccttcggcgcggccgagctcgtg
gccttcctggaggaacggaagatcggcacccgccggctgttcgccggcaacctgacccgg
caccccgcctacgcgaaccaaccgcaccgcgtggtcggggagttgaccaacagcgacatc
gtcaccctgggttccttctgggtcggcgtctacccggggctgaccgacgagatgctcgac
tacgtgatctcctcggtcaaggagttcatcgcggcacggccctag
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