Streptomyces longhuiensis: LGI35_32880
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Entry
LGI35_32880 CDS
T09038
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slon03016
]
LGI35_32880
Enzymes [BR:
slon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LGI35_32880
Transfer RNA biogenesis [BR:
slon03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LGI35_32880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UDM02732
LinkDB
All DBs
Position
complement(7162971..7164254)
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AA seq
427 aa
AA seq
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MTDAQETAADSSLRTTGGAPPDDGGSVAEVPIPLLEPREGIPPVIADEASLAEVVAAFAA
GTGPVAVDAERASGYRYGQRAYLVQLRREGAGSALVDPVACPDLSALGDAIADAEWVLHA
ATQDLPCLREIGMVPSRLFDTELAGRLAGFPRVGLGAMVENVLGYVLEKGHSAVDWSTRP
LPDPWLRYAALDVELLVDLRDALEKELDRQGKLDWAHQEFDAIASAPPAPPRKDPWRRTS
GMHKVRRRRQMAVVRELWTARDRIAQRRDVSPGKVLGDGAIVEAALSLPANVHALAALPG
FGHRTGRRQLEQWQAAVDRAKELPDAELPQPGAPLAGPPPPRAWADKDPVAAARLSAARA
AVSALAETLNMPQENLITPDTVRRVCWEPPGDRSEAAVAEALRGYGARPWQVEQVTPLLA
EALKQTA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagacagttcactgcgaaccaccgggggcgcaccc
ccggacgacggcggctctgttgcggaggtgccgatccccctgctcgagccgcgcgagggc
atcccgccggtgatcgccgacgaggcctccctggccgaggtggtcgcggccttcgccgcg
ggcaccgggcccgtggccgtcgacgccgagcgcgcctccggctaccgctacgggcagcgc
gcctacctggtgcagctgcgccgcgagggcgcgggctccgcgctcgtcgaccccgtcgcg
tgccccgacctgtccgccctcggcgacgcgatcgccgacgccgagtgggtactgcacgcc
gcgacgcaggacctgccgtgcctgcgcgaaataggtatggtccccagccgcctcttcgac
accgagctcgccgggcgcctggccggtttcccgcgtgtggggctcggcgcgatggtggag
aacgtcctcggctacgtcctggagaagggccactccgccgtcgactggtcgacgcggccc
ctgcccgacccgtggctgcgctacgcggcgctggacgtggagctcctcgtggacctgcgg
gacgcgctggagaaggagctcgaccggcagggcaagctggactgggcgcaccaggagttc
gacgccatcgcctcggcgccgcccgcgccgccccgcaaggacccgtggcggcgcacgtcc
ggaatgcacaaggtgcggcggcgccggcagatggccgtcgtacgggagctgtggaccgcg
cgggaccggatcgcgcagcggcgcgacgtgtcgccgggcaaggtgctcggggacggcgcg
atcgtcgaggcggcgctctcgcttcccgcgaatgtgcacgcgctggccgcgctgcccggc
ttcgggcaccgtacgggccggcgtcagctggagcagtggcaggcggccgtggaccgggcg
aaggagctgcccgacgcggagctgccgcagcccggagccccgctcgccgggcctcctccc
ccgcgtgcctgggccgacaaggacccggtcgccgcggctcggctctccgccgcgcgggcc
gcggtgtcggcgctggccgagacgctgaacatgccacaggagaacctgatcacgccggac
acggtccgccgggtgtgctgggagcccccgggcgaccgctccgaggcggcggtggccgag
gcgctgcgcgggtacggggcgcggccctggcaggtcgagcaggtcactccgctgctcgcc
gaggccctgaagcagaccgcctga
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