Streptomyces longhuiensis: LGI35_33220
Help
Entry
LGI35_33220 CDS
T09038
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03030
DNA replication
slon03430
Mismatch repair
slon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGI35_33220
03430 Mismatch repair
LGI35_33220
03440 Homologous recombination
LGI35_33220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slon03032
]
LGI35_33220
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_33220
Enzymes [BR:
slon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGI35_33220
DNA replication proteins [BR:
slon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGI35_33220
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGI35_33220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UDM02794
LinkDB
All DBs
Position
7249314..7250036
Genome browser
AA seq
240 aa
AA seq
DB search
MGWHQELLVGFDLETTGTDPREARIVTGAVIEVKDARPLGHRQWLADPGVEIPADAVAVH
GISNERAASDGEPADRVADSIAETLVGYWRTGVPVVAYNAAFDLTLLSAELHRHGLPSLR
ERLGGVDPAPVIDPYTIDRSVDRYRKGKRNLEAVCAEYGVTLESAHDASADALAAARLAS
AIADRHPKVASLGPARLHESQIEWYAQWAADFQSFLRRKGDAQAVVEGTWPMRELTGPGV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggatggcaccaggagctgctggtcggcttcgacctggagaccacggggacggatccg
cgcgaggcgcgcatcgtcacgggcgcggtgatagaggtcaaggacgcgaggccgctgggt
caccggcagtggctcgcggacccgggggtcgagatcccggccgacgcggtcgccgtgcac
gggatcagcaacgagagagcggcgtccgacggtgagccggccgaccgggtcgcggactcc
atagcggagacgctcgtcgggtactggcgcacgggcgtgcccgtcgtcgcgtacaacgcc
gcgttcgacctgaccctgctctccgccgagctgcaccgccacggcctgccgtcgctgcgg
gagcggctgggcggtgtggacccggcgcccgtcatcgacccgtacacgatcgaccgctcg
gtggaccgctaccgcaagggcaagcggaacctcgaggcggtgtgcgcggagtacggcgtg
acgctcgaatccgcgcacgacgcctccgccgacgccctcgccgccgcgcgcctggcctcc
gcgatagccgaccgtcacccgaaggtcgcctccctcggaccggcccgtctccacgaatcc
cagatcgagtggtacgcgcagtgggcggcggacttccagtccttcctgcgccgcaagggc
gacgcgcaggcggtggtcgaggggacgtggccgatgcgggagctgacggggcccggggtc
tga
DBGET
integrated database retrieval system
