Streptomyces longhuiensis: LGI35_37920
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Entry
LGI35_37920 CDS
T09038
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
slon
Streptomyces longhuiensis
Pathway
slon03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LGI35_37920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_37920
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LGI35_37920
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LGI35_37920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_16
DnaJ_CXXCXGXG
nSTAND1
AAA_22
RsgA_GTPase
AAA_18
AAA_30
MeaB
DUF87
Viral_helicase1
cobW
DUF463
NTPase_1
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
UDM03618
LinkDB
All DBs
Position
complement(8319385..8321766)
Genome browser
AA seq
793 aa
AA seq
DB search
MHEPDHDPFVRVRGAREHNLRGVDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRYF
ESVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRSSPTSRSSVGTVTTLSNSLRMLFSR
AGDYPPGAERLDSDAFSPNTAAGACPQCHGLGVVHRTTEALLVPDATLSIRDGAIAAWPG
AWQGKNLRDVLDALGYDVDRPWSELPQDERDWILFTDDQPVVTVHPVRDAGRIQRPYQGT
YMSANRYVLKTFADSKSQTLRTKAERFLDSAPCPVCGGARLRAESLAVTFGGRTIADLAH
LPLADLAKIFDAPGDASETARVLTGDLLARIATVTELGLGYLSLDRATPTLSAGELQRLR
LATQLRSGLFGVVYVLDEPSAGLHPADTESLLTVLDRLKAAGNSVFVVEHHMDVVRKADW
LVDVGPLAGEHGGRVLHSGPVADLASVADSATARFLFGRERTPVRTVREPRGWLKVGPVT
RHNLRDVSVDVPLSTFTAVTGVSGSGKSTLIGSITEELEGVGRLVVVDQKPIGRTPRSNL
ATYTGLFDVVRKVFAATDAAKARKYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYA
PCPDCGGARYNPPTLEVAYRGRNIAEVLDMTVEGAAAFFEEAGDDAPAVVRSLRTLLDVG
LGYLRLGQPATELSGGEAQRIKLAGELQRVRRGHTLYLFDEPTAGLHPADTQVLMRQLHG
LVDAGNSVVVVEHDMTVVGGADWVIDMGPGGGDEGGHVVAQGPPAEVARAGDSRTAPYLA
RALARRDSASVSG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaacccgaccacgatccgttcgtccgcgtgcgaggcgcccgtgagcacaatctg
cggggcgtcgacgtcgacatcccgcgcgacgtgctcgccgtcttcacaggggtctccggc
tccgggaagtcctctctcgccttcggcacgatctacgccgaggcgcagcgccgctacttc
gagtccgtggccccctacgcgcgccgtctcatccaccaggtgggcgcccccaaggtcggc
gagatcaccgggcttccgccggccgtctccctccagcagcgccgctcctcccccacctcc
cgctcctccgtcggcacggtgacgacgctctcgaactcgctgcgcatgctgttctcccgg
gcgggcgactacccgcccggcgcggagcggctcgactcggacgccttctcgccgaacacg
gcggccggggcgtgcccccagtgtcacgggctcggggtggtgcaccgcacgacggaggcg
ctgctggtgcccgacgcgaccctctccatccgcgacggcgccatcgccgcgtggccgggc
gcctggcagggcaagaacctgcgcgacgtcctggacgccctcgggtacgacgtcgaccgg
ccctggagtgaactgccgcaggacgaacgggactggatcctgttcacggacgaccagccg
gtcgtcaccgtgcacccggtgcgggacgcgggccggatccaacgcccgtaccagggcacg
tacatgagcgcgaaccgctacgtcctcaagacgttcgcggactccaagagccagacgctg
cgcacgaaggccgagcggttcctcgacagcgcgccgtgtccggtgtgcggcggggcgcgg
ctgcgggccgagtcgctcgcggtgacgttcggcggccgcaccatcgcggatctcgcgcat
ctgccgctcgcggaccttgcgaagatcttcgacgcccccggcgacgcctcggagaccgcg
cgggtcctcaccggcgatctcctggcccgcatcgccaccgtcaccgagctcggcctcggc
tacctcagcctggaccgcgccacacccacgctctcggccggtgagctccaacgcctgcgt
ctggccacgcagttgcgctccggtctcttcggcgtggtctacgtgctcgacgagccgtcg
gcggggctgcacccggccgacaccgagtcgctcctcacggtcctcgaccggctcaaggcg
gccggcaactcggtgttcgtcgtcgagcaccacatggatgtcgtccgcaaggccgactgg
ctcgtcgacgtcggcccgctcgcgggcgagcacggcggccgtgtcctgcacagcggtccc
gtagcggatctggcgtccgtcgcggactcggcgacggcccgattcctcttcggccgcgag
aggacgcccgtgcgcacggtgcgggagccgcgcgggtggctgaaggtcggcccggtgacc
cggcacaatctgcgagacgtgtcggtggacgtaccgctctccacgttcacggccgtcacc
ggcgtctccgggtccgggaagtccacgctcatcggctcgatcacggaggaactggagggc
gtgggccgcctcgtcgtcgtcgaccagaagccgatcgggcgcacgccgcgctccaacctg
gccacgtacacgggcctgttcgacgtcgtacggaaggtgttcgcggccaccgacgcggcg
aaggcccgcaagtacggcgtggggcggttctcgttcaacgtggccgggggccgctgcgag
acctgccagggcgagggcttcgtcagcgtcgagctcctcttcctgcccagcacctacgcg
ccctgcccggactgcggcggcgcgcgctacaaccctccgaccctggaagtcgcctaccgg
ggaaggaacatcgcggaggttctcgacatgaccgtggagggcgccgccgcgttcttcgag
gaggcgggcgacgacgccccggccgtcgtccgcagtctgcgcacgctcctcgacgtgggc
ctcggctatctgcggctcgggcagcccgccaccgaactgtccggcggcgaggcccaacgc
atcaagctggccggggagttgcagcgggtgcggcgcggccacaccctctatctcttcgac
gagccgacggcggggctgcaccccgccgacacccaggtcctgatgcggcagttgcacggc
ctcgtcgacgcgggcaactccgtggtcgtcgtcgagcacgacatgacggtcgtgggcggc
gccgactgggtcatcgacatggggcccggcgggggcgacgagggcggacacgtcgtcgcc
cagggcccgcccgcggaggtggcgcgggccggggacagccgcaccgccccctatctggcc
cgcgccctcgcccgccgggactccgcttccgtcagcggctga
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