Streptomyces longhuiensis: LGI35_42925
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Entry
LGI35_42925 CDS
T09038
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
slon
Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slon03021
]
LGI35_42925
Transcription machinery [BR:
slon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGI35_42925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
HTH_Crp_2
GerE
HTH_23
HTH_37
DUF7343
HTH_38
HTH_3
PF0610-like_N
KORA
Motif
Other DBs
NCBI-ProteinID:
UDM04536
LinkDB
All DBs
Position
9426098..9427009
Genome browser
AA seq
303 aa
AA seq
DB search
MTVQVQARDAEGTKHVEALASAQPETHAGVGELPWIEDAGKVAPKDARNLSKLFFDQLQL
LEEGTREHQYARNTLIEMNLSLVRFAGRRFMNRGDGDMEDIVQVGTIGLIKAIDRFDLSR
EVEFSTFAIPYVVGEIKRYFRDTTWAVHVPRRLQELRVDIAKAKEELAIVLDRDPTVKEL
AAHMELSEDEVIEGVVAANGYTAGSLDMPADAGETGPAQVQGRTLADFIGEPDPGMETVE
DLHCLNPLLGRLTDRERHIIEMRFGQEMTQSQIGEVLGVSQMQVSRLLSRTLAKLRTGML
ADD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcaggtgcaggcgagggacgcggagggcacgaaacacgtcgaggcgttggcg
tcggcacagccggagacgcacgccggcgttggcgagctgccctggatcgaggacgcgggg
aaggtcgctccgaaggacgcgcggaatctgtcgaagctgttcttcgaccagcttcagctc
ctggaagagggcacccgcgagcatcagtacgcccggaacactctcatcgagatgaacctg
tcgctcgtacggttcgccgggcgccggttcatgaaccgcggcgacggtgacatggaggac
atcgtccaggtcggaaccatcggtctgatcaaggcgatcgaccggttcgacctgtcccgc
gaggtcgagttctccacgttcgcgattccgtatgttgtcggtgagatcaagcggtacttc
cgcgacacgacctgggcggtccacgtgccccggcggctccaggagctgcgggtcgacatc
gccaaggccaaggaggagctcgccatcgtcctggaccgtgaccccacggtcaaggagctc
gccgcgcacatggaactgagcgaggacgaggtcatcgagggcgtcgtcgccgcgaacggg
tataccgccggctccctggacatgcccgccgacgccggcgagacgggaccggctcaggtt
cagggccgaacgctggccgacttcatcggtgagcccgaccccggcatggagaccgtcgag
gacctgcactgcctgaatcctcttctgggccgtcttaccgaccgggagcgccacatcatc
gagatgcggttcgggcaggagatgacccagagccagatcggcgaggtgctcggcgtctcc
cagatgcaggtctcccgcctcctgagccgcacactcgccaaactgcgcaccggcatgctc
gccgacgactga
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