Streptomyces longhuiensis: LGI35_45485
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Entry
LGI35_45485 CDS
T09038
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slon
Streptomyces longhuiensis
Pathway
slon03030
DNA replication
slon03430
Mismatch repair
slon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGI35_45485 (dnaE)
03430 Mismatch repair
LGI35_45485 (dnaE)
03440 Homologous recombination
LGI35_45485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slon03032
]
LGI35_45485 (dnaE)
03400 DNA repair and recombination proteins [BR:
slon03400
]
LGI35_45485 (dnaE)
Enzymes [BR:
slon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGI35_45485 (dnaE)
DNA replication proteins [BR:
slon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGI35_45485 (dnaE)
DNA repair and recombination proteins [BR:
slon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGI35_45485 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UDM05504
LinkDB
All DBs
Position
p1:complement(104149..107748)
Genome browser
AA seq
1199 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAQKLKPMFAEVDRQGMPAVAMSDHGNMFGAYEFHQVSKGFD
GVKPIIGIEAYVAPSSRRNRKQEFWGPGGQRAMSDDGEGSKDVSGGGRFTHMTMWAENVQ
GLKNLFYMSTEASYTGQFPAGKPRMDMELISEHAEGIIATTGCPSGAIQTRLRLNQYDEA
REVAAVYQDIFGRESYFLELMDHGLSIEKQVRDGLLRLAKELKIPLLATNDAHYIHADQA
DAHDNLLCIGVGKNKADEKRFRFSGNDYYLKTAAEMRELFSEMPEACDNTLLIAERVQSY
DAVFENVDEMPQFPDVPEGETQESWLRKDVLKGLEMRYGAPIPDEVMERFETEMSIIGPM
GFSSYFLVVADICKYARDNGIPVGPGRGSATGSIVAYATRITELCPLEHGLLFERFLNPE
RINPPDVDLDFDDRQRDTMVRYVTEKYGDEYTAMVNTFGKIKAKNAIKDSSRILGYPFQH
GERITKALPPDIMGKSIPLDGIFDSAHPRYGEAGEIRAMYENEPDVKKVIDTAKGVEGLT
RGTGVHAAAVILSKTKLTERIPLHMRAKDGVKITGFDYPSCENMGLVKMDFLGLRNLGVI
DHALKNIRDNRGVHLATVDPGNGDDRVKVIPLDDKKTFELLGRGDTFGVFQLDGGGMRAL
LKLMEPSRFEDIAAALALYRPGPMAANAHTNYALRQNGKQEPAPIHPELKEVLDPILGST
HHLLIFQEQIMAIARTLAGYTLGGADMLRRAMGKKKPEVLAAEWQKFHDGMETNNYSEEA
IKAIWDVMLPFSGYAFNKSHTAGYGLVSYWTAYLKANYPAEYMAALLTSVGDDKDKAGIY
LADARKLGVTVLPPDVNESLAEFAAVGDDVRFGLLSVRNVGENVIESIIAGRKSGGKYAS
FADFLDKVDLPALNKRAVESLIKGGAFDSLGHTRRGLSAAHEMAIDAVVPLKKAAAYGQD
DLFAGLGSDDAADAAGFGMEVQIGEEEWPRRQLLATEREMLGMYVSAHPLDGTENLLAAH
RDTTIVDLIASGRTEGVVRLSGLITSVQPKMTKQGNAWAIVNLADRDGTIEVLFFPATYQ
LVAGALVEDAVVSVQGRLNDRDGTLSIFGQELQTLDVSSAERTGAAPVQLVLPYHRINER
SVKELGRIIGAHPGDNPVRLAVRGVAKTTVYQLGLMVNAATVASDIKGSFGPDIWQGVA
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacagctttgttcacctgcacaatcacaccgaatactcgatgctcgacggcgct
cagaagcttaagccgatgttcgccgaagtcgaccgtcagggcatgcccgcggtcgccatg
agcgaccacggcaacatgttcggtgcgtacgagttccatcaggtgtccaagggcttcgac
ggcgtcaagccgatcattgggatcgaggcgtacgtcgccccgtcctcgcgtcgtaaccgg
aagcaggagttctggggtcccggcggtcagcgggccatgtcggatgacggtgaggggtcg
aaggacgtctccggtggcggccgtttcacccacatgacgatgtgggccgagaacgtccag
ggcctgaagaacctcttctacatgtccaccgaggccagctataccggccagttccccgct
ggcaagccgcgcatggacatggagttgatcagtgagcacgccgagggcatcatcgccacc
accggctgcccctccggtgcgatccagacgcggctgcgtctgaaccagtacgacgaggcc
cgcgaggtcgcggccgtgtaccaggacatcttcggccgggagagctacttcctggagctg
atggaccacgggctgtcgatcgagaagcaggtccgggacggtctgctgcgccttgccaag
gagctgaagatcccgctcctggcgaccaacgacgcgcactacatccacgcggaccaggcc
gatgcgcacgacaacctgctgtgcatcggcgtcggcaagaacaaggccgacgagaagcgg
ttccggttctcgggcaacgactactacctcaagaccgcagccgagatgcgtgagctgttc
tcggagatgccggaggcgtgtgacaacacgctgctgatcgccgagcgcgtccagtcctac
gacgccgtcttcgagaacgtcgacgagatgccgcagttccccgacgtccccgaaggggag
acgcaggagtcctggctgcgcaaggacgtcctcaagggactggagatgcgctacggcgcc
cccatccccgacgaggtcatggagcgcttcgagaccgagatgagcatcatcggtccgatg
gggttctcctcgtacttcctcgtggtcgccgacatctgcaagtacgcccgagacaacggc
atcccggtcggaccgggccgaggctcggcgaccggctcgatcgtggcgtacgcgacccgt
atcaccgaactgtgcccgctggagcacggcctgctcttcgagcggttcctcaaccccgag
cgcatcaacccgccggatgtcgacctcgacttcgacgaccgtcagcgcgacaccatggtc
cgctacgtcaccgagaagtacggcgacgagtacacggcgatggtcaacacgttcggcaag
atcaaggccaagaacgcgatcaaggacagctcgcggatcctcggctaccccttccagcat
ggggagcggatcaccaaggcgctgccgccggacatcatgggcaagtcgatcccgctggac
ggcatcttcgactccgcccacccgcgctacggcgaggcgggcgagatccgggcgatgtac
gagaacgaacccgacgtcaagaaggtcatcgacaccgccaagggtgtcgagggactgaca
cggggcaccggcgtgcacgccgccgcggtcatcctgtccaagaccaagctgaccgagcgc
atcccgctgcacatgcgcgccaaggacggcgtcaagatcaccggctttgactaccccagt
tgcgaaaacatggggctggtcaagatggacttcctgggcttgcgcaacttgggcgtcatc
gaccacgcgctgaagaacatccgtgacaaccgtggcgtccacctggccaccgtcgacccg
ggcaacggcgatgacagggtcaaggtcatcccgctcgacgacaagaagaccttcgagctc
ctcggccgaggcgacacgttcggtgtcttccagctcgacggcggcggcatgcgcgccctg
ctgaagctgatggagccgagccgattcgaggacatcgccgccgccctggccctgtaccgg
cccggtccgatggccgccaacgcgcacacgaactatgccctcaggcagaacggcaaacag
gagccagccccgatccacccggagctcaaggaggtcctggacccgatcctgggttccacc
caccacctgctgatcttccaagagcagatcatggccatcgcccggaccctagccgggtac
acgctcggcggcgccgacatgctgcgccgcgccatgggtaagaagaagcccgaggtcctg
gccgccgagtggcagaagttccacgacggcatggagaccaacaactactcggaagaggcc
atcaaggcgatctgggacgtcatgctcccgttctccggatacgccttcaacaagtcccac
accgccggatacggcctggtctcctactggaccgcctacctcaaggcgaactacccggcc
gagtacatggccgcgctgctcacctcggtcggcgacgacaaggacaaggccggcatctac
ctcgccgatgcccgcaagctcggcgtcaccgttcttccgcccgacgtgaacgagtcgctg
gccgagttcgcggccgtcggcgacgacgtccgcttcggcctgctgtccgtgcgcaacgtc
ggcgagaacgtcatcgagtcgatcatcgcgggccgcaagtccggcgggaagtacgcctcc
ttcgctgacttcctcgacaaggtcgacctccctgccctgaacaagcgcgccgtcgagtcc
ctcatcaagggcggcgcgttcgactccctcgggcacacccgtagaggtctgtccgccgct
cacgagatggccatcgacgccgtcgttccgctgaagaaggccgccgcctacggccaggac
gacctgttcgcgggcctgggcagcgacgacgcggcagacgccgccggttttggcatggag
gtgcagatcggcgaagaggagtggccccgcaggcaactcctggccaccgagcgggagatg
ctgggcatgtacgtctctgcgcacccgctggacggcaccgagaatctcctcgccgcccat
cgcgacaccaccatcgtcgacttgatcgcctcagggcgaacagagggggtggtccgactc
tctggcctgatcaccagcgtgcagccgaagatgacgaagcagggcaatgcgtgggcgatc
gtcaacctggccgaccgtgacggcacgatcgaggtgctgttcttccccgccacctaccaa
ctcgtcgccggcgccctggttgaggacgccgtggtctcggtgcagggccgcctcaacgac
cgtgacggcacgctcagtattttcgggcaggagctccagacactcgacgtgtcctccgcg
gagcgaacgggcgcggctccggtacagctcgtcctgccgtatcaccgcatcaacgaaagg
tccgtcaaggaactcgggcgcatcatcggcgctcacccgggcgacaaccccgtgcgcctc
gcggtccgaggggtggccaagacgaccgtctaccagctcgggttgatggtgaacgccgcg
acagtagcttccgacatcaagggctcgttcggtccggacatttggcagggtgtggcgtga
DBGET
integrated database retrieval system
