Syntrophothermus lipocalidus: Slip_0010
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Entry
Slip_0010 CDS
T01253
Name
(GenBank) D-3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp00260
Glycine, serine and threonine metabolism
slp00270
Cysteine and methionine metabolism
slp00680
Methane metabolism
slp01100
Metabolic pathways
slp01110
Biosynthesis of secondary metabolites
slp01120
Microbial metabolism in diverse environments
slp01200
Carbon metabolism
slp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Slip_0010
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Slip_0010
00270 Cysteine and methionine metabolism
Slip_0010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
slp04147
]
Slip_0010
Enzymes [BR:
slp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
Slip_0010
1.1.1.399 2-oxoglutarate reductase
Slip_0010
Exosome [BR:
slp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Slip_0010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
UDPG_MGDP_dh_C
NAD_binding_2
NAD_binding_7
KARI_N
ACT_9
GFO_IDH_MocA
ACT_4
F420_oxidored
AdoHcyase_NAD
RS_preATP-grasp-like
Shikimate_DH
TrkA_N
3HCDH_N
ThiF
Motif
Other DBs
NCBI-ProteinID:
ADI00818
UniProt:
D7CIF3
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All DBs
Position
11632..13218
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AA seq
528 aa
AA seq
DB search
MKNRRVIVTERIAEEGLELLRAELDVDYRDGISRAELLDIIGEYDALIVRSVTKVNEELV
SRGTRLKMVGRAGNGIDNIDVDACTRRGIIVANTPDSNTISAAEQTIALLLSSVRHTAEA
NAFLKGGNWDRKPFRGVELYGKTVGIVGLGRIGSMVATRLRSFGCRIIAYDPYISDERFE
RFGAEKKNTLEELLREADIITVHTPKNEETYGMIGERELAMCKDGVRVVNCARGGIINEK
ALVDALRSGKVASAGLDVFDEEPAYNNPLFEFKNVVVTPHLGADTVEAQRRVGVNIAEQV
IMGLKGELVPNVVNLPTVLREELETLRPYIDLARAMGSMYYQMEKAPVDRVELGFSGEIA
NQETGLLTIAFLTGLLSGVMSEKINYVNARIKAEERGIKVFEKKEDKKLKGYVNLITARI
FNHEHNLEIAGTLTGGGRPYIVEINGFDTDLYPRGIVVLAENDDRPGVIGPFTTALGEAG
INISMMRVSSKDGVNMMAVSVDSNVDDATLARLRSVSGVRKVRVLRFK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaccgccgtgtcattgtaaccgaacgtatagctgaagaaggattggagttgctg
agggccgagctggatgtagactaccgggacggaattagccgggccgagcttttggatatt
atcggggaatacgatgcgcttatcgtgaggagcgttaccaaagttaacgaggaattggtg
tcgcgaggcactcgtctcaagatggtgggccgggcaggaaatggcatagataatatcgat
gtggacgcctgcacccgtcgcggcatcattgtagccaacacgccggattccaataccatt
tcggccgccgaacagaccatcgctttacttttgtcttctgtccggcatacggctgaggcg
aacgcctttctaaaaggtggaaactgggaccgcaaaccttttcgcggcgtcgaactctac
ggcaaaacggtaggaatagtgggactcggccgcatcggttctatggtggctaccaggtta
aggtcattcgggtgccgtatcatcgcgtacgacccgtatatatcggacgaacggtttgag
cggtttggggcagaaaagaagaataccttagaagagcttttgcgagaagccgatatcatc
acggttcatactcctaagaacgaggaaacttatgggatgataggggaacgagaactggct
atgtgcaaagacggggtccgggtagtgaattgcgctcggggtggcatcatcaacgaaaaa
gctttggtggatgcactaagatccgggaaagtcgctagcgctgggctggacgtttttgat
gaagaacctgcttataacaacccgttgtttgagttcaagaacgtagtggtaactcctcat
ctaggagccgacactgttgaagcacagagacgggtaggtgttaacatcgccgagcaggta
atcatgggtttgaagggagaactagttcctaacgtggttaatctccctacggtcttgaga
gaagagcttgagacgttgcgcccgtacatcgacttggcaagggctatgggcagcatgtat
tatcagatggaaaaagctccggttgaccgggtggaactgggtttcagcggagaaatagcc
aaccaggagacaggactcttgacgattgcttttttgacaggactcctttccggagtgatg
tcagaaaagatcaactacgtaaacgccagaatcaaagccgaagaaagagggataaaggtc
ttcgaaaagaaagaagacaagaagctgaaaggatatgtcaatctgattactgcccgtatc
ttcaatcacgagcataacctagagatcgcaggtaccctgacgggaggaggcaggccatac
atcgtcgaaattaacgggttcgacactgacctttacccgcgggggatagtagtcctcgcg
gagaatgacgacaggccgggagtgataggcccgtttaccactgccctaggcgaagccggt
atcaatatatcaatgatgagggtatcgagcaaagacggggtgaatatgatggccgtcagc
gtcgacagcaacgtggatgacgcaactctcgcccgtctgcgatctgtcagcggggtgcga
aaggtaagggttctcaggttcaagtag
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