Syntrophothermus lipocalidus: Slip_0034
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Entry
Slip_0034 CDS
T01253
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp03030
DNA replication
slp03430
Mismatch repair
slp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Slip_0034
03430 Mismatch repair
Slip_0034
03440 Homologous recombination
Slip_0034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slp03032
]
Slip_0034
03400 DNA repair and recombination proteins [BR:
slp03400
]
Slip_0034
Enzymes [BR:
slp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Slip_0034
DNA replication proteins [BR:
slp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Slip_0034
DNA repair and recombination proteins [BR:
slp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Slip_0034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DnaX_C
RuvB_N
AAA_22
TIP49
AAA_30
AAA_5
AAA_19
AAA_16
AAA_18
AAA_7
Mg_chelatase
AAA_14
DUF815
Sigma54_activ_2
AAA_2
HTH_53
PIF1
Rad17
TniB
Parvo_NS1
AAA_28
nSTAND3
AAA_24
RNA_helicase
AAA_assoc_2
Torsin
Motif
Other DBs
NCBI-ProteinID:
ADI00841
UniProt:
D7CIH6
LinkDB
All DBs
Position
39416..40969
Genome browser
AA seq
517 aa
AA seq
DB search
MTFLSKVVCARGGIMAQLALYRSLRPQRFDEVVGQEQTVRALRNAVQQGRVSHAYLFCGP
RGTGKTSVAKILAKAVNCVEPVDGEPCNRCASCVDIASGSFMDVIEIDAASNRGIDEIRD
LREKVRMMPAQGKTKVYIIDEVHMLTTEAFNALLKTLEEPPESVVFVLATTEPQRIPATI
LSRCQRYNFRRLSQTEILERLKTVAQTQGIESEEKALEVIARRATGSMRDGLSILDQCLA
YGLSSITYQDVLNVLGLVDDRFLSEFFGSIMEGDAGLVLTYIDQAVAAGKEALQFVREVA
DYLRDMLVLKAVGPGAELSRVVGDETLLELGRQAESLDTGLILEVLKRVMQLAGELRFSE
SPRFIMEVTFLELAGLLGSRDKEKVSASSAIAPVKKDSARIKGKEKIASTKGTEVPWAKV
LERVRSKKVTTYALLAEARCLGLKDGLVLVGFKKGFKFHRERMEQKENKDILSNALEETL
KQKVEVQFVMLGDNPEDDPLVRKAIEMFGQEMVEIKD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgactttcttatcgaaagtcgtttgtgcgagaggtgggattatggcccagttagccctg
tacaggagtctaaggccgcagaggttcgatgaagtggtgggacaggagcaaacggtgaga
gccttgagaaatgctgtgcaacaaggccgggtctcccatgcctatctcttttgtgggccg
cggggcacaggtaagaccagcgtcgctaagatactggccaaggctgttaactgtgtcgag
ccggtcgatggagagccttgtaaccgttgtgcttcctgcgtggatatcgcgagtggaagc
tttatggacgtaatcgagatcgatgctgcttccaaccgcggcatcgatgagatcagggac
ttgagggaaaaagtaaggatgatgccagcgcagggcaagaccaaggtgtacataatcgac
gaggtacacatgctaaccacggaggcgtttaacgctcttttgaagaccttggaggagcct
ccggaatcggtcgtatttgttctcgctaccacggagcctcagagaataccggccactatc
ctatcccgttgccagcgttacaattttcgccgcttatcccagactgagatactggagaga
ctgaaaacggtggcccagacccaggggattgagtcagaagaaaaggctttagaggtcatt
gcccgtcgggccaccggcagcatgagggacgggctcagcatactggatcaatgcctggcg
tatggtttgtcttcaatcacttaccaggatgtgttgaatgtactggggctggtggacgac
cgttttctcagtgaattcttcggaagcataatggaaggagatgcgggcctggtcttgact
tatatagaccaagccgtggccgcgggcaaagaagccctgcagtttgttcgcgaggtagct
gattaccttcgggatatgctagtgctcaaggcagtaggccctggggctgagctcagccgc
gtggtaggtgacgagactctgttggagctcgggcgccaggctgagagcttagatacgggg
cttattctagaggtcttgaaaagggtaatgcaactggcgggcgagcttcgcttcagtgaa
agcccacgctttataatggaagttactttcttggaattggccgggttgctggggagtaga
gacaaagaaaaggtgtcggcgagttcggcgattgcacccgtaaaaaaggattcggctaga
atcaaaggaaaagagaaaatcgcatcgaccaagggcacagaagtcccatgggcgaaagtt
ctcgagcgggttagaagcaagaaagtcactacctatgctctgttggcagaagctcgatgc
cttggtcttaaggacgggcttgtgctggtaggctttaagaagggatttaagtttcaccgg
gagaggatggaacaaaaggaaaacaaagatatactatcaaatgcattggaagaaaccctg
aaacaaaaagttgaagttcagttcgtaatgctgggagataacccagaagacgaccctttg
gtaaggaaggccatcgaaatgttcggtcaggaaatggtggaaatcaaagactag
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