Syntrophothermus lipocalidus: Slip_0069
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Entry
Slip_0069 CDS
T01253
Name
(GenBank) metal dependent phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slp03019
]
Slip_0069
Messenger RNA biogenesis [BR:
slp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Slip_0069
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GFIT
Motif
Pfam:
HD
TraI_2
Cas3_HD
MauJ
Motif
Other DBs
NCBI-ProteinID:
ADI00873
UniProt:
D7CIK8
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All DBs
Position
71988..73004
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AA seq
338 aa
AA seq
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MPFRALIKSRTQGISAKGNPYISMQLAVKPGAVPEMGQARHIKANRWTAGEDDISNLVPG
RWINVNRYTVTENERYETSLSIWEYEVTDPPEDPERYVETSKRPADELWEDLLSLVQRIN
DGDLKNMVRALLDENREAFCRTPAAKQYHHAYVGGLVEHTLEVVRIALASAEAMNENGVV
VDTDVLLAGAVLHDIGKTKEYEIDRYGVITINESVKLKGDHCLLGRDMLYRFWENDWPLK
WKVSESRIDAIAHLILSHHGQLEWRAIVEPATTEAVILHLADMISSKANGIDRAIKSARE
NGVAGRFRLYDRSIYPWVGTEQSEREMWPEESSDSEEW
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcagagcgttgataaaatcgagaacccaggggatatccgcaaaaggcaacccg
tacatcagcatgcagttggccgtcaaaccgggagctgtgccggaaatgggacaggcgagg
catataaaggccaacagatggactgcgggtgaagatgatatttcgaacctggttcccggc
cgttggataaacgtcaacagatacacagtaactgagaatgaaaggtacgaaacgtccttg
tcgatatgggaatacgaagtgacagatccgcccgaagatcccgaacgctacgtagaaacc
agcaaaagaccggcagacgaactgtgggaagacctgctttccctggtgcagagaataaac
gacggggacctcaaaaacatggtaagagccctgctcgacgaaaaccgggaagccttctgc
aggacaccggcagcgaagcagtaccatcacgcatacgtaggcgggctggtggagcacacc
ctggaagtggtgagaatcgccctggcgagtgcggaggcgatgaacgaaaacggcgttgtc
gtggatacggacgtgcttctggccggggccgttctgcacgacataggcaagacaaaggag
tacgagatagacaggtatggcgtcattaccataaacgagtcggtcaagctgaagggcgac
cactgcctgctgggcagggacatgctgtacaggttctgggaaaacgactggccgttgaag
tggaaggtatccgaaagtaggattgacgccatagcccatctcattttgagccatcacggg
cagctcgagtggagggcaatcgtggagccggcgacaacggaagccgtgattctgcacctt
gcagacatgatatcttccaaggcaaacggaatcgacagggctatcaagtccgccagggaa
aacggagtggctggcaggttcaggctgtacgacaggagtatatatccgtgggtagggact
gagcagagtgagcgggaaatgtggccggaggaatcgagcgacagcgaggaatggtaa
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