Syntrophothermus lipocalidus: Slip_0071
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Entry
Slip_0071 CDS
T01253
Name
(GenBank) protein of unknown function DUF559
Organism
slp
Syntrophothermus lipocalidus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
AAA_11
AAA_12
AAA_30
AAA_19
DUF559
UvrD-helicase
AAA_16
nSTAND3
ResIII
AAA_22
Helicase_RecD
Viral_helicase1
SLFN-g3_helicase
DEAD
DUF4011
AAA_31
AAA
PIF1
AAA_5
PhoH
AAA_25
SRP54
YqeC
UvrD_C_2
RNA_helicase
AAA_6
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADI00875
UniProt:
D7CIL0
LinkDB
All DBs
Position
73605..78137
Genome browser
AA seq
1510 aa
AA seq
DB search
MGDDTNVRLSKERLTSLYKFLREYVQLRYNFPREINNHPWYRWLKDFPEHHAIQRRLVIY
SDDDDEYRENCVSEIGSYDTVIAVRRPQLTEPPKLPKSLEGWLQPGWDDPFQEAKPYSSR
NAQDAYQNTQVVRFEDDKQREKDLQKWLSLRAKWAENERPAREAMRVFEDLYELYGQLSR
EGGRFELVVGDGILSWTYEHGSIYHPLILIPVQLEFDADVPEFRIIDIGATPELYTAALR
DTNVDPQQLGRIRQELESGGFHPLGSGDASGFLRRLVQALSPHGQFVESGLPPKKTEQPV
IGRYPVLFLRQRNQGFANAIDVILKNLPEREDIPPFLSRIVGVEPPDSDNASNDTAVETL
PGIEPEEILFSKQWNNEQMQIVDRLQRHGGVIVQGPPGTGKTHTIANLIGHLLAQGKTVL
VTAHTSKALRVLRDQIADQLRPLCVSVLDDDLESRKQLEEAVHHIAIRVTQSDADSLEKR
AEGLAFQRKRLIQEIRELKQKLMEAVGSEYREIVVAGKSFDPSKAAQFVAEGVSCHDWIP
GPVELGAPLPLSEEELTKLYRSNGYLTTEEESEMDTVLRIPEDLPEPEDFERMVSLLGCP
VEKNSAELWDSNSKIERSIEELERLTQEAEVLGKKLLEAELWELAIAEAGMKGEKHKEPW
QKLLELTDQIDDYLADCQDLLMLHRPQLAREEDILYEEQETLCQRVASELERRGGKVNKL
SLILNPTLRRFTQNARVASGQPQLPEHFKALAAAARLAQLRKELWQRWNYLIEERGGPSL
GVLEGEPERVASRYGHRIKYWLGFWKDLFLPLKEKIEDEGFKWDIFRQLQNPDFSEGGEL
RVLGDALLEQLPEILKSRVLTLRQSKAIDEITELEKKLLEVSKGAKESGIIEKLSVAVRK
LDVEAYRELIKRIADLKKKQGDFRDRQQLLACLECVAPGWAEAIRSRKGVHGKEDIPGDP
YVAWQWRQLNDELTRRASTSIPELQEELEKKTTVLRQVTTELIEQRAWAEQCRRTNLHQR
LALVGWLNVMKRLGKGTGKRAPQLRVEASRRLRDAREAVPVWIMPIARAVEQFDPSSTRF
DVVIVDEASQCDILGLAVLYLGKSTIVVGDHEQVSPEGVGQELERITSLISEYLSDIPNA
ALYDGRRSVYDIAREAFGGVIMLVEHFRCVPEIIQFSNSLCYNGRIRPLRESSNVALKPH
VVPYRVREAYAEKKINKKEALELASLLLAAVQHPAYKGKTFGVVSLVGEDQARLIDSFLR
TYLSEREYKERRILCGTAAQFQGDERDVMFLSLVDAPAGGPLPMREDDRFRQRFNVAASR
ARDQMWVVYSLDLHVDLKPGDLRRRLIEYALDPNAQNRALASEISRTQSPFEREVLQRLV
RSGYRVRAQWPVGYYFIDLVVESTGGRIAIECDGDRWHPVEKLEEDLARQAVLERLGWKF
IRIRGSEFYRDKDGTMERVFKQLRSYGTEPEGQVCEASSSNNRSELVDEIISKATLISSE
WETDQVRKCV
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgacgatacaaatgtccgcttatcaaaggaaagattaaccagcctttacaaattc
cttagggagtatgtccaactgcgttacaattttccaagagaaattaacaaccatccttgg
tatcgttggctaaaagactttcctgagcaccatgcaattcagcgaagattagtcatttat
agcgatgacgatgacgagtacagagaaaattgtgtatcggaaattgggtcatacgacact
gttatcgcagtgcgccgacctcaactcactgagcctccaaaattgccgaaatctctcgaa
ggatggttacaacccgggtgggacgaccctttccaggaggcaaaaccatactccagtagg
aacgcgcaggacgcataccaaaacacacaagttgttcgttttgaggatgataagcagcgc
gagaaggacttgcaaaaatggctaagcttgcgcgcgaaatgggcagaaaatgagcgtcct
gcaagggaagctatgagagtttttgaagatctatatgaactatacggacagttgagtcgg
gaaggtggacgatttgagctagtagttggtgacggcatcctcagctggacatatgaacat
ggtagcatttatcatcctctgatactaattcctgttcaattggaattcgatgctgatgtg
ccagaatttcgcattatagacataggcgcaactccagagctgtatactgctgcacttcgc
gataccaacgttgatccacaacaactgggtcgtatccggcaggaactagagagtggcggg
tttcatccgttgggaagcggagatgcttctggcttccttcgacggctcgtacaagcgcta
tctccgcacggacagtttgttgaaagtggattaccaccgaaaaaaacggagcagccagtt
atcggacgatatccagtgctctttctgcgtcagcgcaatcaaggttttgcaaatgcaata
gatgttatccttaagaacttgcctgaacgcgaggatataccgccgtttctgtcaaggata
gtgggtgtcgagccaccagatagtgacaatgcatccaatgacactgcagtcgaaacattg
cctggcatcgagcccgaggaaattcttttcagcaagcaatggaacaacgaacagatgcag
attgtggatcgattgcaacggcatggcggagtaattgtccaggggccgccaggtacagga
aaaactcataccattgccaacctgattgggcatcttcttgcccaaggcaagacggtgctt
gttactgcacatacttcaaaagcattacgtgtattgcgggaccagatagcggatcagttg
cgtccactatgcgtgagtgtgctcgatgacgatttagagagcaggaagcagcttgaagaa
gccgtgcatcacattgcgataagagttacccaaagtgatgcggactctcttgaaaaaagg
gcagagggattggcttttcagagaaagcggctaatacaagagataagggaattaaaacag
aaactaatggaggctgttggcagcgaataccgggaaatagtcgttgccggaaagtcattt
gacccttccaaagcagcgcaatttgttgcagaaggagtttcgtgccacgattggattcca
ggtccagttgaactgggggcacccttgccgttatcagaagaggaattaaccaaactgtat
cgaagcaacggttacctcacgaccgaggaagaatctgaaatggacacggtactccgaatc
cccgaagaccttccagaacctgaagattttgaaagaatggtatctcttctcggctgcccc
gtagagaaaaactcagcagaactttgggactccaattcgaaaatcgagcgctcaatcgaa
gaactggagcgtcttactcaagaagcagaggtgctcgggaaaaagttactagaggccgaa
ctatgggaactggccatcgcggaagcgggaatgaagggggagaagcacaaagaaccatgg
cagaaattgctggagctaactgaccagatcgacgattaccttgccgattgtcaggatctg
ttgatgttacaccgcccgcagttggctagagaggaagatatactttatgaagagcaggaa
accttgtgtcaaagagtggccagcgaactggaacgtcgaggaggaaaggtaaataagctt
tctctgatactgaatccaactttacggagatttacgcagaacgccagagtggcatcaggt
caaccccagctacccgaacacttcaaagctttggccgctgctgcgcgattggcgcagttg
cgtaaagaattatggcagcgatggaactatttgatagaggagcggggaggtccgtctctc
ggagtcttggaaggagagccagaacgagttgcttcacgttacggccatcgcatcaagtac
tggttgggattttggaaagatctctttttacccttaaaagaaaaaatagaggacgagggg
tttaaatgggacatctttcgccagctacagaatcccgacttctccgagggtggcgaattg
agggttttaggggatgctttgttagaacaactgcctgagatattgaaaagcagggttttg
acccttcggcagtccaaagccatcgacgagattacggaacttgagaagaaactgctcgaa
gtttccaagggcgcaaaagagagtggaattattgagaagttgtcagtggcggtgagaaaa
cttgatgtggaggcctatcgagaactaatcaagaggattgccgatctaaaaaagaaacag
ggtgacttccgggatcgccaacagctcttagcgtgccttgagtgtgttgcgcccggttgg
gcggaagcaatccggagccggaaaggagtacatggcaaggaggatataccgggagatccc
tatgtagcttggcagtggcgacagcttaacgatgagctgacgagaagagcttcaacatca
attccagagttacaggaagaactggagaagaaaacaacggttctccgccaggtgacgacc
gaactcatagaacagcgggcttgggctgagcaatgcaggcgcacaaacctgcatcagcga
ctggccttggttgggtggctcaatgtaatgaaacgactgggtaagggaacaggtaaaaga
gctccccaactgcgagtcgaggcttcccgtcggctcagggatgctcgcgaagcggtaccg
gtttggattatgccgattgcaagggctgtcgaacagtttgatcccagtagtaccagattc
gatgttgtaatagttgacgaggctagccagtgtgacattcttggtctggcagtgttgtat
ctaggcaaaagtaccatagtggtcggagaccacgaacaggtgagccccgaaggggttggg
caggaattggaacggataacttcacttatttctgagtatctcagtgatatacctaatgct
gcactttatgatggtagacgttctgtctatgacatagcgcgcgaggcttttggtggggtc
atcatgttagtggagcatttccggtgtgtgccagaaatcatccagttcagtaacagcctg
tgctacaatggacggataagaccattgagagagtccagcaatgttgcacttaaacctcat
gttgtaccataccgtgttagggaagcatatgcggaaaaaaagataaacaaaaaggaagcc
ctagaattggcttcattgctcttagcggcagtacagcacccagcatataaagggaaaacg
tttggcgttgtttcgttggtgggtgaggaccaagctcgcttaatagactcttttttgcgc
acgtatctatctgaaagggagtacaaggagcgccgcatcctttgcggcaccgcagctcag
tttcagggcgacgaacgggacgtgatgttcctatctcttgtagatgcgcctgctggaggt
ccactgcctatgcgagaggacgataggtttcggcagcggtttaacgttgctgccagcagg
gcacgggatcaaatgtgggttgtttattcgcttgacctgcatgttgatttgaagccggga
gacctccgacgtcggctgatagagtacgccctagacccaaacgctcaaaatcgagccctc
gcatctgaaatcagccggacccaatccccgtttgaacgcgaggtactgcagcggttggtg
cgctccggctaccgcgtgcgagcccagtggccggttggttactattttattgacctcgtc
gtagaaagtactggcggcagaatagccattgaatgcgacggggaccgttggcatccagtt
gaaaaactagaggaagatctagctcgtcaagctgttttggagcggttagggtggaaattc
atccgcatccgcggaagtgagttttatcgcgataaagatgggactatggaacgggttttc
aaacagctccgttcgtatggcacagaaccagagggtcaggtgtgcgaagcaagttcaagc
aataaccgtagcgagttggtggatgagattatctctaaggcaactctgattagctctgaa
tgggaaacggaccaagttcggaaatgtgtgtga
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