Syntrophothermus lipocalidus: Slip_0112
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Entry
Slip_0112 CDS
T01253
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slp03032
]
Slip_0112
03036 Chromosome and associated proteins [BR:
slp03036
]
Slip_0112
03400 DNA repair and recombination proteins [BR:
slp03400
]
Slip_0112
DNA replication proteins [BR:
slp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Slip_0112
Chromosome and associated proteins [BR:
slp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Slip_0112
DNA repair and recombination proteins [BR:
slp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Slip_0112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
DUF2267
ROS_MUCR
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
ADI00912
UniProt:
D7CIP7
LinkDB
All DBs
Position
120662..120934
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTDLVAKVASKANMTKKDVEKVINTLFATIEEALKDGSKVQLVGFGTFEVRERQARKG
RNPQTGEEIEIPAARIPAFKAGKALKDAVV
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
ttgaacaaaacggacttggttgccaaagtggcgagtaaggctaacatgaccaagaaagac
gtagagaaggtcatcaacactctctttgccaccatagaagaagctcttaaggatggtagc
aaggtgcagctagtcgggtttggtacattcgaagtgagggagcggcaggcgagaaaggga
cgcaatccccagacgggcgaagagatcgaaataccggctgcccggataccagctttcaag
gcgggcaaagctctcaaggacgcggttgtataa
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