Syntrophothermus lipocalidus: Slip_0262
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Entry
Slip_0262 CDS
T01253
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K16052
MscS family membrane protein
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slp02000
]
Slip_0262
Transporters [BR:
slp02000
]
Other transporters
Pores ion channels [TC:
1
]
Slip_0262
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Msl2-3_C
MS_channel_TM1
Motif
Other DBs
NCBI-ProteinID:
ADI01049
UniProt:
D7CJG0
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All DBs
Position
complement(262172..263317)
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AA seq
381 aa
AA seq
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MGFFERTVGVASAMVQATSKQGWITIGVAGTLLIGFWVLRRLLTRLITAVCYKMASRTKT
SLDNHLIEAFTKPLEWFFALLGLYLALNYLSLKPAADAFISNVFRTGVILLISAGLYNFA
GSFEALSEEYEELFGAKVDKILVPFLSKVLKFVIIALAVTVIAQEWDYKIDGLIAGLGLG
GLAISLAAKDALANVFGGIVIITDKPFSIGDWIQTPSVEGTVEDISFRSTKVRTFTQALV
TVPNSTLASEPITNWSRMGKRRVMFKLGLTYGTSRTQIREFVSAVERLLTSHPEVDQETI
VVRFDGFGESSLDILIQFFVKPTALADYARVREDINLEIMALMEEQGLSVAFPSRSLYFE
TPATVTPMRPPVAEAEPIKKD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
gtgggttttttcgaaaggacagttggagtagcaagtgccatggtccaggccacaagcaaa
caaggctggataactatcggcgtagctggaaccctcctcatcgggttttgggttctgcgt
aggcttctgacccgcctcattactgctgtctgctacaagatggcctcccgaaccaaaacc
agcttggacaatcacctaatcgaagcatttaccaagcccctggagtggttttttgccctt
ctgggcctctacctggccttgaattacctttccttgaaacctgcggctgacgcttttatt
tccaacgtgtttcgaaccggtgttattctcctgatcagcgccggtttgtacaacttcgct
ggcagtttcgaggccttgagcgaagaatacgaagagctgtttggggccaaggttgacaag
atactggttccttttctctccaaggtgctcaaattcgtcataatcgccctggccgtaacc
gtcatcgcccaggaatgggactataaaatagacgggctgatagccgggctgggattgggc
ggactagcaatctccctggcggcaaaagatgctttagccaacgttttcggcggaatcgtc
ataatcactgacaaacccttctccatcggtgactggatccaaacccccagcgttgaaggc
acggtcgaagacataagctttcgcagcaccaaggtccggaccttcacccaggccctggtg
acagtgcctaattcaaccctggcatccgaaccgataaccaactggtcccgcatgggcaag
cggcgagtcatgttcaagctggggctgacctacggcacctctcgtacccagatccgggag
tttgtttcggctgttgaaagactgctcacatcccaccctgaggttgaccaagaaacgata
gtggtgcgcttcgacggtttcggagaaagcagcctcgacatcttaatacagttcttcgtg
aagccaacggctttggccgattacgctcgggtaagagaggatatcaacctcgaaataatg
gctcttatggaggaacaaggccttagcgtggccttccccagccgtagcctttactttgaa
acgccggcaaccgttactccgatgcggccaccggtggcagaagccgaacccatcaagaaa
gattaa
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