Syntrophothermus lipocalidus: Slip_0352
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Entry
Slip_0352 CDS
T01253
Name
(GenBank) tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Slip_0352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slp03016
]
Slip_0352
Enzymes [BR:
slp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Slip_0352
Transfer RNA biogenesis [BR:
slp03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Slip_0352
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
DUF7411
QueC
ThiI
Arginosuc_synth
Asn_synthase
NAD_synthase
PAPS_reduct
Motif
Other DBs
NCBI-ProteinID:
ADI01136
UniProt:
D7CK22
LinkDB
All DBs
Position
358588..359610
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AA seq
340 aa
AA seq
DB search
MSERVAVLMSGGVDSGVAALLLKEQGYDVIGLTMLNWSAEVCQKAAEVARFLGISHHVVD
LRAEFKRQVIDYFCRTYEEGLTPNPCVVCNEFVKFGLMLEQAWDVGCRWVATGHYARVEL
DETTGRHLLKKGVDPKKDQSYFLYRLKQNQLCRLLFPLGNMTKQETKSIAAKYGLPVAKA
EESQEVCFIEGDYRQFLAAKGVKGVPGPIRDQEGNVLGTHQGLISYTVGQRRGLGLRAGR
PFYVIDLDTRNNTLVVGEEKELYRQELLATDNNFIPFESLTEPLMVEAKIRYTAPLAQAR
LTPVSGGIKVEFVHPQRAVTRGQSVVYYQGDVVVGGGIIA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaagggttgcagtgcttatgagcgggggagtagacagcggcgttgccgccctg
cttctcaaggaacaaggctacgatgttatcgggttgaccatgctgaactggtcggccgaa
gtttgccaaaaggcagcagaagttgctcgtttcctggggattagccaccacgtagtagac
ctgcgtgctgagtttaaacgccaggtcatcgactacttttgccgaacgtacgaggaagga
ttgactcccaatccttgcgttgtgtgcaacgagtttgtcaagtttggactgatgctcgag
caggcctgggacgtaggatgccggtgggtggctaccgggcattacgcgcgggtggaactt
gacgagaccaccgggagacatctactcaaaaaaggggtcgaccccaaaaaggaccaatcg
tattttctctatcggcttaagcagaaccagctatgccgtttattgttcccattgggtaac
atgaccaaacaggagacgaaatcaatcgccgcaaaatatgggctgcccgtggccaaggca
gaggaaagccaggaagtttgtttcatagaaggggattaccgccaatttctggcggccaaa
ggggtaaaaggggttccggggccaatacgggaccaagaagggaatgtgctggggactcac
cagggcttgatctcatatacggttggacaaaggcgtggcctgggccttagggccggtcgg
cctttctacgtgattgacctggacaccagaaacaacacgctggtggtgggggaagaaaag
gagctttaccgccaggaacttttggctacagacaataattttatccccttcgaatccctg
acggagccgctaatggttgaagcaaaaatacgatatacggccccgttggcacaggctcgc
cttactcccgtgtctggagggataaaggtcgaattcgttcatccccagagagccgttacc
cgtggccaatcggtcgtgtactaccagggggatgtagtggtgggtggcgggataatagct
tag
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