Syntrophothermus lipocalidus: Slip_0374
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Entry
Slip_0374 CDS
T01253
Name
(GenBank) ABC transporter related protein
KO
K02006
cobalt/nickel transport system ATP-binding protein
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Slip_0374
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slp02000
]
Slip_0374
Transporters [BR:
slp02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalt transporter
Slip_0374
Nickel transporter
Slip_0374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_15
AAA_23
AAA_5
AAA_28
AAA_29
URGCP_GTPase
AAA_27
RsgA_GTPase
AAA_25
AAA_14
NACHT
nSTAND_NTPase5
AAA_22
nSTAND3
AAA_24
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADI01158
UniProt:
D7CK44
LinkDB
All DBs
Position
complement(380444..381244)
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AA seq
266 aa
AA seq
DB search
MDKKPLFKLREVSFGYRQGEPVFSNLSLEIMPGESVCILGANGAGKSTLLKMLAGLVFPF
AGGLEAFEEQLTEKRMENDRFAQEYHRRVGFVFQNPDAQLFTTRVWDEIAFGPLQLGLSP
EEITTRVEDVIKMLSISSLKDRSPYHLSQGEKKKVAIASVLVMNPQVLILDEPTTGLDPK
TQRWLVELILELNHNGRTIITSTHDLNLVHLLADRVLLLSEDHRLVYDGPSQKVLANRRL
LASVNLIDEYSHTHDQGQHTHLYVHG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtggataagaaacccttattcaaactacgagaagtcagtttcggttatcggcagggcgag
ccggttttttccaatctctccctcgaaataatgcctggcgaaagcgtctgtatcctaggt
gcgaacggtgctggcaaatctacccttctaaaaatgctggccgggctcgtttttcccttt
gctggcgggttagaagctttcgaggaacaacttacagaaaagcggatggaaaacgatagg
ttcgctcaagagtatcaccggcgggtcggattcgtttttcagaatcccgatgcccagttg
tttaccaccagagtttgggacgagattgccttcggtccgcttcagttgggactgagccct
gaggagatcacaaccagggttgaagatgtcataaaaatgctctctatttccagcttaaaa
gacagatccccttaccacctcagccaaggagaaaagaaaaaggtggctatagcttccgtc
ctggttatgaatccccaagtccttatattggatgagcctactacgggtttggatcccaag
acccagcgctggctggtcgagcttatcttagagctgaaccacaacggtcgaacgataatc
acttctacccatgacctgaacctggtgcacctgctggccgaccgggttttgttgttgtcc
gaagaccaccgtttggtttacgacggtcccagccaaaaagttcttgccaatcgccggctt
ttggcgtcggtcaatcttatcgatgaatacagccacacccacgaccagggccaacacacc
cacctgtacgtgcacgggtga
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