Syntrophothermus lipocalidus: Slip_0435
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Entry
Slip_0435 CDS
T01253
Name
(GenBank) hemolysin A
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slp03009
]
Slip_0435
Enzymes [BR:
slp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
Slip_0435
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
Slip_0435
Ribosome biogenesis [BR:
slp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Slip_0435
23S rRNA modification factors
Slip_0435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
S4_2
Methyltransf_25
PrmA
Methyltransf_11
CMAS
Methyltrans_SAM
Methyltransf_12
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
ADI01219
UniProt:
D7CKI4
LinkDB
All DBs
Position
437393..438205
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AA seq
270 aa
AA seq
DB search
MEKSRLDTLVHDRGLAPTREKARALILAGKVVVNGNRVDKPGTKVPVDANVAVLEGGLPY
VSRGGLKLEGAIRDFGLSFTGKRVLDVGASTGGFTDCALQHGALLVVALDVGYGQLDWRL
RNHERVLVKEKTNIRNFSLEDLGEPVDIVTIDVSFISLGKVLPAVSSLVREGGEIVALVK
PQFEAGRDQVGKKGVVRSRETHNHVILKVIESAVGLGLSVRGVTYSPLTGPEGNIEYFLY
LVKDGQGQAVAARDIERVVENAHRQLGDTG
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttggagaaaagtaggttagatacccttgtacatgaccgaggactagcgcccacccgggag
aaggctagagccttgatcctagcggggaaagtagtggtaaacgggaaccgggtagataag
cctggtaccaaggttccggtagatgccaacgttgcagtcctggaaggtgggcttccttat
gtgagccgcggagggctgaagttggaaggtgcgatccgagatttcggtctttcttttacg
ggcaaaagggttctggatgttggagcttctaccggcggttttacggattgcgcactacag
cacggagcccttttggtggttgctctggatgtgggctacggtcagctggactggcgttta
cgcaaccacgaacgggtactggttaaggagaagacgaatataaggaatttttccttagaa
gacctgggagagccggtagacattgtcaccatagacgtgtctttcatttctctcgggaaa
gttttgccggcggtatcttccctggtacgcgagggaggagaaatagttgccctggtgaaa
ccccaattcgaagctggccgtgaccaggtgggaaaaaaaggggtcgttcgctcgcgcgaa
acccataaccacgtgatattaaaagtcattgaatcggcggtcgggcttgggctgtcggta
cgaggggtcacttattcccctttaactgggccggaaggaaacatcgagtattttttgtac
ctcgtgaaagacgggcaagggcaagccgttgctgcccgtgacatagaaagggttgtagag
aatgcccacaggcaattgggggacacaggatga
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