Syntrophothermus lipocalidus: Slip_0522
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Entry
Slip_0522 CDS
T01253
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slp03400
]
Slip_0522
DNA repair and recombination proteins [BR:
slp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Slip_0522
Archaeal homologous recombinant proteins
Slip_0522
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
ADI01306
UniProt:
D7CKS1
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Position
541936..543087
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AA seq
383 aa
AA seq
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MRFLHTADWHLGRIFYGVHLTDDQAYVLDELVRLVKDTEPDVVLIAGDVYDRAVPPIEAV
KLLDDVLTRLVMECGVQVILVAGNHDSPERLGFAGRLLVTRGLHIVGKPRNDAQPLVIYD
QWGPVYFCPIPYAEPPVIQERFGMQEVGNHEQAMKAVVSQMVSRLPRGARSVAVAHAFVA
GAEASESERPLAVGTAGTVSRECFLTFNYTALGHLHRPQSAGGDSIRYSGSLLKYSFAEA
SHRKSVSLVELDGEGNVTLEEIPLSPRRDVRCLEGYLADLLKGPHGGGSCHDYLMITLND
EGAILDAMGRLREVYPNLLHVDRPHLVPRAENIRPSTDHRKMTVLDLFSSFFEQVTSRPL
AQEESKAFARVVEDWGRKERETE
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
ttgaggtttttacatacagccgattggcacctggggcggattttttacggggttcacctg
actgatgaccaggcgtatgttctggatgaactggtcaggctagtgaaggatactgagccg
gacgtggttttaatcgcgggggatgtctacgaccgggcggtgccgccgatcgaggcggta
aagctcctggacgatgttctaacccggctggttatggagtgcggggttcaggtgattctg
gtggcgggtaaccacgacagccctgaaaggctgggatttgccggacggctactggtcacc
cgggggttacatatcgtgggcaagcccagaaatgatgcacagcctctggtgatttacgat
cagtggggaccggtttatttctgccccattccctatgccgagccgccggtgatccaggaa
cggttcgggatgcaagaggtaggtaatcatgagcaggccatgaaggccgtagtttcccaa
atggtcagccgtcttccccggggcgcaagatcggttgcggtagcccatgcgtttgtggcc
ggggcagaggcgagcgaatcggagagaccgttggccgtcgggacagcaggaaccgtgagc
cgggaatgtttcttgacttttaactacaccgctctgggccaccttcaccggccgcagtcg
gcaggtggtgatagcatccgctactcggggtctcttttgaagtactcgttcgccgaggct
tctcaccgcaaatccgtaagcttggtggagttagacggggaggggaacgtaaccctggaa
gagatacctttgtctccccggcgagatgtccggtgcttggaagggtacctggccgacctt
ttaaagggacctcacggtggaggttcttgccacgattacctcatgattaccctcaacgat
gaaggggcgattctcgatgccatgggcaggctgcgagaagtttacccgaatctccttcac
gtcgaccgaccccaccttgttccgcgagcggagaatatccgcccgtcaacagaccaccgc
aaaatgacggtcttagatcttttttcatcgtttttcgagcaagtgacctcccgaccgctg
gcgcaagaagagtcgaaggccttcgcccgagtggttgaggattgggggcgaaaggagcgg
gaaacggaatga
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