Syntrophothermus lipocalidus: Slip_0535
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Entry
Slip_0535 CDS
T01253
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp00300
Lysine biosynthesis
slp00470
D-Amino acid metabolism
slp01100
Metabolic pathways
slp01110
Biosynthesis of secondary metabolites
slp01120
Microbial metabolism in diverse environments
slp01230
Biosynthesis of amino acids
Module
slp_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Slip_0535
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Slip_0535
Enzymes [BR:
slp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Slip_0535
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ADI01319
UniProt:
D7CKT4
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All DBs
Position
556783..558114
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AA seq
443 aa
AA seq
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MRINAQGHLEVGGIDVLDLVREFGTPLYVLDEEGFRANCRAFRDAFAKYGHSLVIYASKT
LSCLAACIIVEEEGLGLDVVSGGELYTALRASFPPERIFFHGNNKTLDELVMAVESRVGR
VVVDNFYEIELLENVCERLGRTQNILLRITPGVEAHTHEYIKTGQIDSKFGFTLANGDAL
KAVDTVCRTKNLRLMGLHCHIGSQIFEMDAYAHATEIMVDLLAEIKNRFGLELEELNMGG
GFGIYYHSGDEPRQPEEWAKAVMSTLRSKTEANALRMPKVIVEPGRAIAGPAGITLYTLG
SYKEIPGVRKYVAVDGGMTDNPRPALYGSKYEAVIANRADREPDELVSVAGRCCESGDML
IWDIKLSHPQPGDILAVFATGAYNYSMSSNYNRVGRPAMVLVRDGQADLIVKRESYEDLI
RNDVIPERLARGDVVKIAAGKKL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaacgcccagggacacctcgaggtgggaggaatcgatgttctagacctggta
cgggaattcggtacgcccctgtatgtgctggatgaagaaggatttcgcgctaactgccgg
gcttttagggatgcttttgccaaatacggtcattccttggttatttatgccagcaaaacc
ctgtcctgcctggcggcttgcataatcgtggaagaggagggtctgggccttgatgttgta
tccgggggcgagctttatacggctctcagggctagttttccacctgagcggattttcttc
cacggcaacaacaagactctggatgaactggttatggcggtagagtcccgggtaggacgg
gtggttgttgacaatttctacgagattgagcttctggaaaacgtctgtgagcggttggga
cgcacccagaacatccttctgcggatcactccgggagtagaggcccatacccacgagtat
ataaaaacggggcagatcgattcaaagttcgggtttactctggccaacggggacgcccta
aaggcagtcgatacggtctgccgaacgaagaatctccgcttgatgggactgcactgtcac
atcggttcccagatatttgaaatggatgcctacgctcatgctactgagataatggtagat
cttttggccgagatcaaaaaccgttttggcttggagttggaggaactgaatatgggtggg
ggcttcgggatttattatcacagcggggacgagccccggcagccggaggaatgggcaaag
gcggttatgtcgactttgcgcagtaagaccgaggccaacgcattacggatgccgaaggtt
atagtggaaccgggtcgggctatagcgggtccggctggcattactctgtacaccttgggc
agttataaagagattcctggggtccgcaaatacgtagcggttgatggaggtatgacggat
aatccccggcctgccttgtacggttcgaagtacgaggcggttatcgccaaccgggccgac
cgggagccggacgaactggtgtcggttgccggacgctgctgcgaatcaggcgatatgttg
atatgggatataaagctttcccatccgcaacctggagatattttggcggttttcgctact
ggagcatataattattcaatgtctagcaactataaccgggtaggacgcccggccatggtg
ttggtcagagacggtcaggcagacttgatcgtgaagagggagtcttatgaggatctcatc
aggaacgacgtgattcccgaacgtttggccagaggcgacgtggtcaagattgcggccggc
aagaagttatga
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