Syntrophothermus lipocalidus: Slip_0721
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Entry
Slip_0721 CDS
T01253
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp00550
Peptidoglycan biosynthesis
slp01100
Metabolic pathways
slp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Slip_0721
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slip_0721
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
slp01003
]
Slip_0721
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slp01011
]
Slip_0721
Enzymes [BR:
slp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Slip_0721
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Slip_0721
Glycosyltransferases [BR:
slp01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Slip_0721
Peptidoglycan biosynthesis and degradation proteins [BR:
slp01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Slip_0721
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PBP_1A_C
Herpes_US9
Motif
Other DBs
NCBI-ProteinID:
ADI01501
UniProt:
D7CLB6
LinkDB
All DBs
Position
complement(737898..740252)
Genome browser
AA seq
784 aa
AA seq
DB search
MQTNDKIRRKRRRPPWGAILIVCFLVLMGSSVGVVLGAIRSLPTWDPNKLMGSETSIIFD
DQGRQVTRLHAAENRINVALKDIPPHLINAVIATEDQDFYKHHGVNLKRIAGAMMVNLVR
HSKAQGASTITQQLARVSFLYPEKTYERKIKEILLAFQLESKYSKDEILEFYLNKVYFGS
GAYGVQAAAQTYFGKNVQDLNLSESAMLAGVIQSPGRLSPFTNYDLAKKRQQVVLNNMVH
CGYISQEEADKAYDQPLSFKKSLSSDSRYGYFVDSVIEEADQILRGYYENPQYAIYNEGL
RIYTTMDSEVQKHAEDVYADSSFFPSGKSKKGQEVQSAMVLLDHHTGEIKAIIGGRKYEQ
RRGFNRAIDSLRHPGSAFKPVVVYGPALEQGYMPFYVLDDSPVTFPTPSGPWSPQNYDGK
YRGLITMRTAVQWSVNVYAVKLSELVGIKNGIDFAEKLGITSLVRAGQKNDMGLSTALGG
LTKGVSPLELTAAYGCFANNGVYVKPHTIIKITTAEGHVIYTHRPQYRRVMKPTTAWLMT
SMLQTVVQAGTGTRAQIPGVPCAGKTGTSQDLQNAWFVGYTPNYTCGVWMGYDQLERMYN
VAGGTYPARIWKSVMTKALEGEPRQAFVTPKGIVSVQVCNKSGLLPSQLCPDKCIISDYA
TEDNIPDKICDRHVLYNICPDSGKLATEHCPFPVPKAFVNVPADSRDPDKPPTEYCDIHS
SAPTSSEMVPICKDPRHGNKLYRANIPGPNETGGCPSSVVVEEALPKGVDPPPCPLPDHQ
VQAR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
ttgcagactaacgataaaattcgccgaaagagaagacgacccccatggggagctatactc
atagtgtgtttcctagtcctgatggggtcatcagtaggagttgtgctaggagccatccgc
agccttccaacctgggacccgaacaagctcatgggttctgagacttccatcattttcgac
gaccaaggccgtcaagtcaccaggttgcatgctgcggaaaatcgaatcaatgtagcccta
aaagacatacctcctcatctcatcaacgccgtgatagcaaccgaagaccaagatttctac
aagcaccacggggttaacctcaagcgtatcgcgggggccatgatggtcaatctcgttcgc
catagcaaggcccagggagccagcaccataacccaacagctagcccgtgtatccttccta
tacccggaaaagacttatgaacggaaaataaaagaaatactgctggcttttcagcttgaa
tcgaagtactcaaaagatgagatcttggaattctatttgaataaggtgtatttcggcagc
ggcgcttacggggttcaagctgcggcccaaacctatttcgggaaaaacgtgcaagattta
aaccttagcgaatcggccatgctggccggcgtcatccagagtccgggacgcctgtcgcct
tttaccaactacgacttagccaaaaagaggcagcaggttgttcttaataacatggttcac
tgcggctacattagccaggaagaagccgataaagcgtatgaccagcctttatctttcaag
aaaagcttgtcatctgactcgcgttacggttactttgtggactcggtgatagaagaagct
gaccagatcctgcgcggttattacgaaaacccgcagtatgctatatataatgaaggactt
cgtatatacaccaccatggattcagaagtgcagaaacacgccgaagacgtctacgctgac
tccagtttctttccctctggcaaaagcaaaaaaggccaagaggtccagtcagccatggtg
cttctcgaccaccatacgggtgagataaaggccatcattggcggacgtaagtatgaacaa
aggaggggttttaaccgggcaatcgattctcttcgccatcccggctccgcctttaagccg
gtagttgtttatggacctgctcttgaacaggggtatatgcccttctatgttctagacgat
tctcccgtaaccttccctacccccagcggcccctggtctccgcagaactatgacggcaag
taccggggactcattaccatgcgtactgctgtacaatggtcggtaaacgtgtatgcggtt
aagctgtccgagcttgtcggcatcaaaaacggtatagatttcgccgaaaaattggggata
accagtttggttagagcgggccagaaaaatgatatgggcctctcgacggctttgggcggt
cttaccaaaggggtgagtccgctcgagcttaccgcggcctacgggtgctttgccaacaac
ggggtgtatgtcaaaccccataccattattaagataacaaccgctgaaggacacgtgata
tacacccaccgtccccaataccgccgcgtaatgaaacccaccacagcctggctcatgacc
agcatgctgcagaccgttgtccaagcaggcaccggtactcgagcccaaatacccggggtc
ccctgcgcaggcaaaaccggtaccagccaggatcttcaaaatgcttggttcgtcggctac
acccctaactacacctgcggggtatggatgggttacgaccagctggagaggatgtacaac
gtggccggtggcacttatccagcccgcatctggaaatcggtgatgacaaaagctctagaa
ggggagccccgccaggctttcgtgacaccgaagggcatagtctcggttcaggtctgcaac
aagtccgggttactcccttctcagctttgcccggacaaatgtatcatctctgactacgca
actgaagacaatattcccgacaaaatctgcgaccggcatgttttgtacaacatatgcccc
gactccggaaaactggccaccgagcattgtcctttcccggtaccgaaagcttttgtcaac
gttcctgcagacagccgggacccagacaaaccaccgaccgagtactgtgatattcactcg
tctgcccccacatcttcggagatggtacccatatgcaaagacccgcgccacggtaacaaa
ttgtacagagcaaacatccccgggcccaatgaaaccggaggctgcccttcttcggtcgtg
gtcgaagaagcactgccaaagggcgtcgatcctccgccgtgtcccttgcctgaccatcaa
gtacaggcgcgatag
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