Syntrophothermus lipocalidus: Slip_0918
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Entry
Slip_0918 CDS
T01253
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Slip_0918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slp03400
]
Slip_0918
Enzymes [BR:
slp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Slip_0918
DNA repair and recombination proteins [BR:
slp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Slip_0918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ADI01698
UniProt:
D7CLW3
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All DBs
Position
952889..953734
Genome browser
AA seq
281 aa
AA seq
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MEHFPRVGAHLPVAKGLKHTVDEAQAMGLEALQIFLRNPRGMKARELTEEEIEYFIENTK
KADISPVVVHIPYICNPAAAKEEIYELAYRVIAEDLARCDLIKADYLVLHPGAYTVSSPG
QATARLVALLHRVLTDYEGNTRILVETMSGQGTEIGRNLEEMAKILEELGRPPQVGVCLD
TCHLYGAGYDIVDPGGLERTLREMDELVGTDKVRLVHANDSAGGLGSKKDRHAHIGQGNI
GENGFALLCHHPLLRQLPFILETEYSGIARDVETLKRIRAV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggagcattttccacgcgtaggggctcatctacccgtggccaaaggcttgaaacacacg
gtcgacgaggctcaggctatgggtttagaagcattacagatctttttgcgcaaccctcga
gggatgaaggcgagggaactgacagaggaagagatcgagtatttcatcgaaaacacgaaa
aaggccgacatctctcctgtggtggtccacatcccgtacatatgcaacccagccgcagcc
aaagaagagatatatgaactggcttaccgcgttatagccgaagatcttgcccgctgcgat
ctcatcaaagccgattacctggtgttacatccgggggcctacacggtgtcttctccgggt
caggctactgcgaggctggtggccttgttacatcgggttttgaccgactacgagggtaat
acccggatcttggtcgaaaccatgtccggccagggtactgaaatcggccgaaacctagaa
gagatggcgaagattttggaggagttgggtcgtcctccccaagtcggggtatgcctcgac
acctgtcacctgtacggcgcaggttacgacatcgttgatcccggagggctggaacgcacg
cttagggagatggacgaacttgtcggaacagacaaggtccgactggttcacgccaacgac
agcgcaggcggtcttggctccaagaaagaccgtcacgcccatatcggacagggtaacatc
ggagagaatggatttgctcttctctgtcaccatcctctcttgcgccagcttccattcatc
ctagaaacagagtactcggggattgcgcgtgatgtcgaaaccctcaagcgaatccgggca
gtttga
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