Syntrophothermus lipocalidus: Slip_0929
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Entry
Slip_0929 CDS
T01253
Name
(GenBank) cobalt ABC transporter, ATPase subunit
KO
K02006
cobalt/nickel transport system ATP-binding protein
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Slip_0929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slp02000
]
Slip_0929
Transporters [BR:
slp02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalt transporter
Slip_0929
Nickel transporter
Slip_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
SMC_N
AAA_25
AAA_23
RsgA_GTPase
DLIC
MukB
AAA_24
AAA_22
AAA_16
AAA_13
nSTAND_NTPase5
MMR_HSR1
ABC_ATPase
Zeta_toxin
T2SSE
AAA_15
Motif
Other DBs
NCBI-ProteinID:
ADI01708
UniProt:
D7CLX3
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All DBs
Position
complement(962374..963258)
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AA seq
294 aa
AA seq
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MTKEVYVFEVQDLSYRYPGQVNGLKNVNCCIPEGKRTVIMGQNGAGKSTLLWTLTGVLRP
HQGRVLFQEKPLDYSKPGLTYLRSRVGLVMQNPDTQVFCPTVYQDVAYGPTNSGLLKHEI
EDRVKWALQAVGASHLVERPVPFLSFGEKQKVALAGVLAMRPSVILLDEPASGLDAAGVE
SLFSELDRLHSQGVTLVMTTHDIDLAWSWADYFIIMDRGTTVWEGDFSELSQDPHLLFEF
GLKPPVVTVVHESLLKIGFIPPSLPRPRHIRDLISAIATESPSKKVREWIASRP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagaagtatacgtcttcgaggtccaagacctgagttaccgttatccaggtcaa
gttaacggactgaagaatgtaaactgttgcataccggaaggtaaaaggacggttatcatg
ggacaaaacggggccgggaaatccacgctgttgtggacactgactggcgtgttacgtccg
catcaaggccgtgtccttttccaagaaaaacccctggattattccaaacccggcctaacc
tatctgcgttcccgggtagggttagtgatgcagaaccccgacacccaggtattctgcccg
actgtatatcaagatgtggcgtacggaccaactaactcgggtcttttaaagcacgagata
gaagatagagtcaagtgggccctgcaagcggtgggggctagccatctggtggaacgccca
gttccgttcttaagctttggggaaaagcaaaaggtcgccctagccggggttctggccatg
cggccctctgtaatcctcctggacgaacctgcatctggcctggacgccgctggtgtagaa
tcattattttcggaactcgacaggttgcatagccaaggggtaaccttggtaatgaccact
catgacatagatttagcctggagctgggctgattacttcataatcatggatcgagggact
accgtttgggagggagacttttcagaactttcgcaagaccctcacctcttattcgagttc
ggactcaagcccccggtcgtcaccgtcgttcacgaaagcttgctcaagatcgggtttata
ccgccctcgctaccaagaccgcggcatatacgggacctgataagcgcaatcgcaaccgaa
tcaccttccaagaaggtccgggaatggatcgcgagccgcccgtag
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