Syntrophothermus lipocalidus: Slip_0949
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Entry
Slip_0949 CDS
T01253
Name
(GenBank) GTP-sensing pleiotropic transcriptional repressor CodY
KO
K03706
transcriptional pleiotropic repressor
Organism
slp
Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slp03000
]
Slip_0949
Transcription factors [BR:
slp03000
]
Prokaryotic type
Helix-turn-helix
Other families
Slip_0949
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CodY
HTH_CodY
HTH_24
HTH_Crp_2
MarR_2
TrmB
Rrf2
GntR
HTH_41
MarR
Ribosomal_S25
Motif
Other DBs
NCBI-ProteinID:
ADI01728
UniProt:
D7CLZ3
LinkDB
All DBs
Position
983824..984606
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AA seq
260 aa
AA seq
DB search
MAGVSLWKRCLGLSEVTEQQDEAPVDFGQMAALIAQNIDCNVYIVGRRGRILGWSVEEDN
GDFPEIEKLLDYVERFPESFNRDFLNLSQPLINRRLGRKCVFRMRRTACDCKGKVFTIIP
VQGGRSRLATLVLYRREPEFSEEELVLGKVAALVIANEIMYLKSERQETVSQRKASLGAA
LAAISQSEREALYHLLSELKGKEGVLVASHVADRVGLTRSVVASALRKFESAGIIESRSL
GMKGTYIRLLVDNILDELRG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
ttggcgggggttagtctttggaaaaggtgtctcggtttgagcgaggtgacagagcagcaa
gacgaagcaccggtggattttggccagatggcggctttgattgcgcaaaatattgactgt
aacgtttatatagtgggacgaagagggcgaatcttggggtggtccgttgaggaggacaac
ggcgatttccctgaaattgaaaagttgttggattatgtcgaacgcttccccgagagcttt
aaccgggattttctcaacctgtcacaacctttgatcaaccggcggttggggagaaaatgt
gtttttcggatgagaagaacagcttgtgactgcaaaggaaaggtattcactataattcca
gttcagggcggccggagcaggctcgctaccctggtcctttaccgccgtgaaccagaattt
tccgaggaagagctggttctgggaaaagtggcagctctcgttatagccaatgaaatcatg
tacctgaagtccgagagacaagaaaccgttagccagagaaaggcttcgctcggagcggca
ttagcggctatttcacagtcagaaagagaggcactttatcaccttttgtctgagcttaaa
ggtaaggaaggggtcttggtggctagccacgtggccgaccgggtagggttgacccggtca
gtagtggccagcgctcttcgcaagtttgagagcgccggcatcatagagtctcgatcgctg
ggcatgaaaggtacttacataagacttctggtagacaatatattggacgagcttcgcggt
taa
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