Syntrophothermus lipocalidus: Slip_1005
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Entry
Slip_1005 CDS
T01253
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp00920
Sulfur metabolism
slp01100
Metabolic pathways
slp01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Slip_1005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slp03400
]
Slip_1005
Enzymes [BR:
slp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
Slip_1005
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
Slip_1005
DNA repair and recombination proteins [BR:
slp03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
Slip_1005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADI01784
UniProt:
D7CM49
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All DBs
Position
1036827..1037825
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AA seq
332 aa
AA seq
DB search
MSRSDDWRVIAAAIAQEPELVVTGHVIPDGDCIGSMVALYLGLAVLGKEVVAVIEDKLPE
TYRYLKGFNSIRRPEMVERWPATVIYLDCSDPERVGVKTLSCLKNCETVINIDHHPSNTF
FGNLNRVEPGKASTAELVLELLDEMQVPIDQSIASAIYTGIIMDTGCFQYSNTRPETLRA
AARMLDQGAQLDTIRNNLFESRPVVEVKLLQQALNTLSFTSDGRIAWMVLTYEDIARLEA
QDYHFEGLINYARFIEGVEVGLLFREIEPGVIKVGFRSKEKVDVNSIAARFGGGGHVRAA
GARLEGDIADACHRVIEAVKEVVTDCRDVTGF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggagtgatgactggagggtgatagcggcggctattgctcaagaaccagaattg
gtggtgactggacatgttattcccgatggcgattgtatcgggtccatggttgctctctat
ctgggtttagctgttctgggcaaagaagtggtagctgttatagaagacaagctcccggag
acgtaccggtacctcaaggggttcaattctattaggagaccggagatggtcgagcggtgg
ccggcaaccgtgatttacctggactgctcggatcccgagagagtaggtgtcaagaccttg
tcctgtttaaagaactgcgaaacggtgatcaacattgatcaccatcccagcaacacgttt
tttggtaaccttaaccgggtggaacccggaaaagcttctactgctgaattggttctggaa
ttgttagatgaaatgcaggttcccatcgatcagtccatagcgtcggccatatacacgggc
ataatcatggataccgggtgtttccagtacagcaatacccgcccggagactttgagggca
gcagcccggatgcttgaccagggagcgcaactggataccattaggaataacctgttcgag
tcaagaccagtggtcgaagtgaagttgttacagcaggcgctgaataccctttcctttaca
tcggacggtaggatagcctggatggtgttaacctacgaggatatagcccgcctggaagcc
caagactaccattttgaagggttgataaactacgctcgatttatcgaaggagtcgaggta
gggctgctgtttcgcgagatcgaaccgggtgtaataaaggttgggtttcgatcgaaggaa
aaggtagatgtgaattcgattgctgctagatttggaggaggcggtcacgtccgggctgct
ggggctcgcctcgagggtgacattgccgacgcgtgccacagggttatagaggcggtaaag
gaagtggttacagattgcagagatgtcacgggtttctga
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