Syntrophothermus lipocalidus: Slip_1139
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Entry
Slip_1139 CDS
T01253
Name
(GenBank) diguanylate cyclase/phosphodiesterase with GAF sensor
Organism
slp
Syntrophothermus lipocalidus
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
HisKA_7TM
GAF
DUF5904
Motif
Other DBs
NCBI-ProteinID:
ADI01916
UniProt:
D7CMI1
LinkDB
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Position
complement(1181410..1184484)
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AA seq
1024 aa
AA seq
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MSLPTVFSLVYLAAFFTYFCFGAYVLFLNSRALTNRLFAAACLTLCVWTFTYSIVISAPD
YHTALFWRRLSALGWGTFHSVLVHLCLSMTGRHRLLSKPWVYFLLYVPAIINVYVFGASE
EWSSVQHVLVKTGTGWTNVFANNLWDLYFNVYFVGFDVAAMWLLWRWRCETEDKREKTQS
RILLFSFLLAFVLGAAFDVFLNAYTPLKVPQLASVFIIIPIATFLYCIKRYGLMLPSETR
IAETGHILSEIQRRQVYFFIGVASGAGGVFNLLLYFVWGVDLQVMLWISLVMFACCLLVL
SLPFLPLPSGVQDTVMAAVVAGFVFSMTYYTKNINAANIVWSFPLLLMLTACVFSARRIL
ITIVAAAVVTELWLWLELPRKELTVGPFEHMSRIIVYLFGAFFAFLVNRIYMQRLQENEE
QVGLQQVISSMSADFATVSAENFDTKVDKALETIGKLYRADLAHLVIFSEYNKSAVRAYE
WRADSTDPSSTPFDQRDSYHSWLTEQLKEKKRLFMPDIERVPELPPESKKLLLACGTKSM
LAVYLESSHRPIGYLEIQALSQDAQWRADHLETLQIIANILAHAFARIKSEQEVYRLAYY
DYLTGLPNRFLMWDLLEQAVSTAAAKGTSVGIILIDLHSFKEINDTIGHEAGDMLLKKIA
QSITDCVRPGDVVCRFGGDEFVVVMTGVTAYNVLSDTAERIIEAVRKPVMIHNQEFFVNS
NAGISVYPLDGKNPEDLVKNADLAMNASKERGTNRYAFYSREMRGEIQQKTILINGLYRA
LEKQELLLYYQPQVDILTGRITGVEALIRWNHPGLGMVQPSVFIPLAEQSGLIHSIGEWV
LRTACEQNKRWQDIGLPPIRVAVNLSPEQFKNPKLVAIVKNVLEDTRLPPQYLELEITES
VAVKEAETVIRSLRQLKELGVSIAIDDFGSEYSSLGRLRSMPVDRIKMAMCLIQDLPTTP
KDEAIAKAILYLARNIGVRVVAEGVETEQQLEFLTRWSCREVQGFYFYRPMPAEKVEEIL
RQGQ
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttcctacagtattctcgctcgtttacctagctgcgttctttacatacttctgt
ttcggtgcttacgtactgttcctgaacagcagggccctcaccaaccggttgttcgctgcg
gcgtgcttaacgctttgtgtatggacctttacatattccatcgtaatatcggcgccggat
tatcacactgcgcttttttggagacgcttatcagctctgggttggggcactttccacagc
gtactcgtccatctctgcctgagtatgaccgggcggcacagactactttcaaaaccgtgg
gtttatttcttgctctacgtgcctgcgataataaacgtctacgtttttggagcaagcgag
gaatggtcttccgtccagcatgtcctagtaaaaacaggcacgggctggacaaacgtcttt
gcgaacaacttgtgggatttgtacttcaacgtatacttcgtcggctttgatgtcgcagcc
atgtggctcctctggcgttggcgctgcgaaactgaggacaagagggaaaaaacccaatcc
cgcatattgcttttttcttttttgcttgcttttgtcttgggcgctgctttcgacgttttc
ctgaatgcttataccccgcttaaagtcccccaattagcatctgtcttcataatcatccca
atagctacctttctttactgtatcaaacgctacggtttgatgttgccttcagaaactagg
atagcagaaacggggcatattctgagcgagatacagcgccggcaggtttatttcttcata
ggagtggcgtcaggggcagggggggtgtttaatctcctgctctatttcgtatggggagta
gacctccaagtaatgttgtggataagcttggtaatgtttgcctgttgcttgctagtgttg
tctctccccttcctgccgttgcccagcggcgttcaagacacggtcatggcggcggtggta
gctggtttcgtcttttccatgacgtattacacgaaaaacatcaacgccgccaacattgtt
tggtcgttccccctgctcctcatgttgacggcttgtgtcttttcggccagacgcatcctc
ataaccatcgtggctgctgctgtagtcacggagctctggttatggttagaactgcccaga
aaagagctgaccgttgggcctttcgagcacatgtcaaggattatcgtctacctcttcgga
gcgttttttgcttttctggtaaaccgtatctatatgcagaggctgcaagaaaacgaagaa
caagttggcctgcagcaagttatttctagtatgtccgcggattttgccacggtaagcgcc
gaaaattttgataccaaggtggataaagcgctcgaaaccatcgggaaactttaccgagca
gacctggctcatctcgttattttttcagagtataacaagtcggcggtccgggcctacgaa
tggcgcgccgacagcactgacccttctagcactccgtttgaccagcgggattcctatcat
tcttggctgacggagcagcttaaagagaaaaagcgcttgttcatgccggatatcgagagg
gtgcccgaattaccccctgagagcaaaaagcttcttctggcatgtggtaccaagtcgatg
ctggctgtttatctcgaaagcagccaccgtccgataggatatttggaaattcaagctcta
tcgcaagatgcccaatggcgtgcagaccatctggaaaccctgcaaattattgctaatatt
ttggctcatgcctttgccaggataaagtccgaacaagaagtctatcgtttggcgtattac
gattaccttaccgggcttcccaatcggtttcttatgtgggatctgttagaacaagcggta
tcgacggctgcggcaaaaggcacatcagtcggcataatactcatcgatttgcactccttt
aaggagataaacgataccatcggccatgaagctggggacatgctgctgaagaagatagct
cagagtataaccgactgtgtccgaccgggtgacgtagtgtgccggtttggaggagatgag
tttgttgtcgttatgaccggtgtgactgcctacaatgtcctgtctgacactgctgaacgg
attatagaagccgtgcgaaaaccggtaatgatccataaccaagagttctttgtcaattcg
aacgccggtatctcggtataccctttggatgggaaaaacccggaagaccttgttaagaat
gcagatctggctatgaacgcctctaaggagcgaggcacgaatcggtatgcgttttactcc
cgcgagatgaggggagaaatacagcagaagacgatacttatcaacgggctttatcgggct
ctggaaaagcaagaactgctcctctactaccagcctcaagtagatattttgactggcagg
attacgggcgtagaagccttgattcgatggaaccaccccgggttagggatggttcagcct
tcggttttcattccgctcgcagagcagtcgggccttatccactcgataggcgaatgggta
ctgagaaccgcctgcgagcagaacaagcgctggcaggatataggactgcctcctatcagg
gttgccgttaacctgtcgccagaacaatttaagaacccgaagttggtagcgatagtcaaa
aacgtgttggaagatacacgtttacccccgcaatacctcgaattggaaatcactgaaagc
gtcgcggttaaggaagcggaaactgttattaggtccctgcgccaactcaaagaactggga
gtttcaattgctatcgacgattttgggagtgaatactcttcgctgggtcgtttacgctcg
atgccggtagacaggatcaagatggcgatgtgcttaatacaggaccttcccactactcca
aaggatgaagccattgccaaggccattttatatcttgccaggaacatcggggtgagggta
gtcgccgagggcgtagagacagagcaacagctcgagtttttgaccaggtggagctgccgg
gaggttcaaggattttacttttacagacctatgccagcagaaaaagtcgaagagatactg
aggcaggggcagtaa
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