Syntrophothermus lipocalidus: Slip_1484
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Entry
Slip_1484 CDS
T01253
Name
(GenBank) hydroxymethylbutenyl pyrophosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp00900
Terpenoid backbone biosynthesis
slp01100
Metabolic pathways
slp01110
Biosynthesis of secondary metabolites
slp03010
Ribosome
Module
slp_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Slip_1484
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Slip_1484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
slp03011
]
Slip_1484
Enzymes [BR:
slp01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
Slip_1484
Ribosome [BR:
slp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Slip_1484
Bacteria
Slip_1484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
PCB_OB
S1_2
OB_RRP5_4th
HVO_B0008_C
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADI02247
UniProt:
D7CNG2
LinkDB
All DBs
Position
complement(1539799..1541739)
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AA seq
646 aa
AA seq
DB search
MDVALEASRQGGKCYSLGPLVHNDAVVAYLCEKGIAVAETLDEVETGSVIVIRSHGVSPR
VLEEARLRGLRVFDATCPLVGRVQSLARQLREEGYELVVFGDRTHPEVLGILGWVGEKAT
VIGSPEEARSFAAVKKLGVVAQTTKSEEDFYSVAAELLPKGREIRVFNTVCEATKKRQQA
ALELCGKVDIMIVVGDKKSSNTRTLATMCQRTGVKTIQVESARDLSPDWFPAGCRVGVTA
GASTPDWIIKEVLDKMVEFEGNVATDEIREDAPTREQSFVEMEAEMAESLGKGMDRGSVV
TGVVIQVTDDEVMVDVGGKSEGVIPLRELSVRDVSSAKEVVKEGDTIEVYVLRWDDDGTI
LLSKKRVDMKKAMDRLEEAFRNGEVIEGTVLKSVKGGLLVDVGVVAFLPASHVDQGFARN
LEEYVGQTLPVKVIEFNRNKRRGSQVVVSRKEVLIEEKERKRKEFWDNIEEGQIRQGVVK
RLTDYGAFIDLDGYEGLLHISEMAHSRVEHPSQVLTEGSVIEVYVLGVDREKERVSLSRK
KILKSPWETVAERYHEGDVVAGKVVRTAPFGVFVELEPGVDGLVHISQLSRKRVDKPEDV
VEVGEEVKVKVLSVDPAEKRIGLSIKELQEGADPAFTQEYLENQNT
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
ttggatgtagctcttgaggccagtagacagggtggtaaatgctacagccttggcccactc
gttcacaatgatgcagttgtggcttacttatgtgagaaggggatagcggttgccgaaaca
ttggatgaagtcgagacgggttcggttattgtcatccgctctcatggtgtaagtccgcgg
gttttggaagaagcccgtttgcgtggactaagagtcttcgatgctacctgccctttggta
ggtagagtacagtccttggcgaggcagctccgcgaagaagggtacgagttggtcgttttt
ggcgataggactcaccctgaggtgttaggtatactggggtgggtaggagaaaaggcgacg
gtgatcgggtcccctgaagaagctcggtcttttgccgcggtcaagaaattgggagtagtt
gcccagactaccaagagcgaagaggatttttattctgtggcagcagagttgctacctaaa
ggacgtgagataagggtttttaacactgtctgtgaggctactaagaagaggcaacaagcg
gcactcgagctttgcggcaaagtagatataatgatagtagttggggacaaaaagagttcg
aataccaggacattagctacgatgtgccagcggaccggagtgaagactattcaggtcgaa
agtgcccgagatcttagcccggactggttcccggctggatgccgggttggcgtgacggca
ggagcctccactccggattggataattaaggaggttttggacaagatggttgagtttgag
ggaaacgtagctaccgacgaaataagggaagacgcccccactcgtgagcagtcctttgtg
gagatggaggctgagatggctgagtctctagggaagggaatggaccggggtagtgtggtc
accggggtcgttattcaggtaactgacgatgaggtcatggtggacgtgggcggtaagtca
gaaggagtaatccccttgcgcgagctttcggtaagagatgtcagttcggcgaaagaagtg
gtgaaagaaggggatacgatagaagtatatgtcttgcgatgggacgatgacggaaccatc
cttctttctaagaaaagggtcgatatgaagaaggctatggaccgtctagaagaagcattc
cgaaacggagaagttatagaaggaacggtactcaaaagtgtaaaaggcggtttattggtt
gacgttggagtggtggcttttttgcccgcttcccatgtggaccaaggttttgcacggaac
ctggaagaatatgtagggcagaccctaccggtaaaggtcattgagtttaaccgaaacaaa
agaagaggttcccaggttgtcgtttctcgtaaggaagtacttatcgaagaaaaggaacga
aagcgcaaggagttttgggataacatcgaagaagggcagatccgacagggcgtagtgaaa
aggcttaccgattacggggcttttattgacttggatggatacgaagggttacttcatatt
tcggagatggcgcactctcgggtagagcatccttctcaggtgttgacagagggaagcgtt
atcgaggtttacgttttgggagtagacagggaaaaagagcgggtttcactgagccgcaag
aaaatactaaaaagtccctgggaaactgtagccgaaaggtaccatgaaggagacgtcgtt
gctggaaaggtagtacggactgcgccgtttggagtttttgttgagcttgaacccggtgta
gatgggttggttcatatatcccagttgtctcggaagcgcgtagataaacccgaagacgtg
gttgaggtcggagaggaagtcaaggtaaaagtcttgagcgtagatccggctgagaagcgg
atagggctttctataaaggagctccaggaaggagctgatcctgcttttacccaggagtat
ttggaaaaccagaatacctga
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