Syntrophothermus lipocalidus: Slip_1690
Help
Entry
Slip_1690 CDS
T01253
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Slip_1690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slp02000
]
Slip_1690
Transporters [BR:
slp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Slip_1690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADI02448
UniProt:
D7CP13
LinkDB
All DBs
Position
complement(1760370..1761965)
Genome browser
AA seq
531 aa
AA seq
DB search
MYVSSRRLSVVGALLGLFLLLSWTYWSRSTYTVSLQSRPFMVGIVGYIKTLDPALVTTHQ
EKLAASTIYEGLVRYDESTGTIRPNLAQDWKISSDGKEISITLKRNVRFHNGKRLKASDV
KDSWELSFDKTKWDRKWLFFPIAGAKERLNGKAKELAGVRVVDEDTLKITLDRPDAAFVS
SLTNTVFWIRDTKDRGQVLAGTGPFKFQELANGKVTVTRYDRYHRGRAKLGEIQFISYSD
VEKAWADYTAKKLDYLDEVPLAKVKEIRTSTYYHGLFTVKPVQAIYALGFNVNREPFADN
HYLRRALNYAVDRQTIIDNINGGLGVPMKGAYPMGLAGYDRGMSGYDYDPERARELLEEA
GYPDGQGLPTLTLVFNESPGHRRVAEAVAAQLANVGISVKLQGVTWEQYLKGLTNCSYPF
FRLGWEADYPDIDGFLYPLYYSQNVGIGNFTGYSNPQVDKIIDTARSETVSSRERLNLMR
RAEAVIVDDAPMLWLYQREAFKMIGKEVRGFKLNTMEMVDWLTLELETAGS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgtttcaagccgccggctgtcagttgttggggcgttgttagggctttttctcctc
ttgagttggacatactggtcacgcagcacttacacggtcagtcttcagtctagacctttc
atggtggggattgttggatatatcaagacgttagaccccgctttggtaactactcaccaa
gaaaaactggcggcatccacgatttacgaaggtttggtcaggtacgatgaaagcacgggg
accataaggccaaatttagcccaagactggaagatatctagtgacgggaaggaaatcagt
attactcttaagagaaatgtacggtttcataacggtaaaaggctcaaagccagcgatgtt
aaggactcctgggaactgtcttttgacaaaaccaagtgggacaggaagtggctcttcttc
cctatagcgggggcgaaagagagacttaacgggaaagctaaggaacttgcaggggtcagg
gtagtcgatgaagataccttaaaaatcacccttgaccgtccggatgctgcttttgtttct
tctctgacaaatacggttttttggataagggataccaaggatcgagggcaagttctggcc
ggaaccgggccttttaaattccaagaattagccaacggtaaggtgacggtgaccaggtac
gaccgctatcatcggggaagggctaaactgggcgaaatccaattcatcagttattccgac
gtagaaaaggcttgggcggattacacggcgaagaagctggactacctggatgaggtgccg
ctagctaaagtcaaagagatacggaccagtacctattaccacggtctgtttacagtgaag
cccgtgcaagccatttatgctctagggtttaacgttaatcgcgaaccgtttgccgataac
cactatctgcggagagcgttgaattacgctgtggaccgccaaacgattatcgataacatt
aatggtggcctgggggtaccgatgaaaggagcataccctatggggcttgcggggtatgac
cggggaatgtctgggtacgactacgatccggaacgagccagggagctcttggaggaggcg
ggatatccagacgggcaggggttacctactttaactttggttttcaatgaaagcccaggc
caccggagggtagcagaagcggtggcggcccagcttgctaacgttggcatcagtgtgaag
ttgcagggcgttacctgggaacagtacctgaagggcttgaccaactgttcctacccgttt
ttccggttgggatgggaggcagattatccggatatcgacggttttctatatcctttgtac
tacagtcaaaacgtgggaatcggcaattttactggctattctaacccccaagtagataag
ataatcgacaccgctcggtcggaaacggttagcagtcgggaacgcctgaaccttatgagg
agagcagaagccgtcatcgtggacgatgcaccgatgttgtggctttaccagcgggaggct
tttaagatgatagggaaggaagtgcgaggctttaaactgaataccatggagatggtagat
tggctgactttggaactcgaaacggctgggagctaa
DBGET
integrated database retrieval system
