KEGG   Syntrophothermus lipocalidus: Slip_1915
Entry
Slip_1915         CDS       T01253                                 
Name
(GenBank) Superfamily II DNA/RNA helicase required for DNA uptake (late competence protein)
  KO
K02240  competence protein ComFA
Organism
slp  Syntrophothermus lipocalidus
Brite
KEGG Orthology (KO) [BR:slp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:slp02044]
    Slip_1915
Secretion system [BR:slp02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Slip_1915
SSDB
Motif
Pfam: Helicase_C ResIII DEAD Terminase_3
Other DBs
NCBI-ProteinID: ADI02668
UniProt: D7CPN3
LinkDB
Position
complement(1965789..1967648)
AA seq 619 aa
MPCRRYVIYVAWNDKKYKLGMSANPQIDLSFLNRNEGYDHIAYISSPLPLAVSDYVLSTI
SKPQERIGKDYSSGLKLPLVSSPARSVKRIIDAKFKQVKKELEQLKEECFLEKPLHFSSK
SISIDYFSLHRYEDALEDILAGRIYYRREIERRLKERGIELDNLDVLLHLSTLRGQVQQV
PSIKIAEPDRMVCNRCGHHERIKKAYCNVGKRECYFCEGCLMLGESKPCEALYAAPARPR
MQENYVKSVRLNLDIAFSLPQYEAFEALARFVRKDSLSEAMVWAASGAARPEVAYGAIRE
ILKRGGRVLFGIPRKEIMEEMNYRLTQAFPGVTVAGVRGKVTKAVKDPDIVLASAYHALK
YYRNFDLVILDEAEAFPFRACDMLVNALRRARKTDGKYVYITSTPDSAMYARAQRGEVKV
IMIPLRVHGIPLPVPKMIVEKDIQGERKIPDSLFGLVRETIEEDLAQLLVVVPDQGTSAR
IGAFLREKFMEMAYGDADRLLMSTGCQDEEQQRKVNSWVRGEFPILVTTNLTRRGDVAPN
TNVIVVYADNPTFDEGALLQLAGRVGWSDSYPTGKVWFIASRMTRPIEGAIRKINLLNEE
AEKKGLLETGAVKRSDLKS
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgccatgccgcaggtatgttatttacgtggcgtggaacgacaagaaatacaagctggga
atgtctgccaatccccagatcgacctttccttcttgaaccgtaatgagggatacgaccat
atagcctacatctcgtctcccctacccctggctgtaagtgactatgtgctgtcgaccatt
tcgaaaccccaggaacggataggtaaagactattcttccgggctcaagctgccccttgtt
agttctccggcgagaagtgtgaagcgcattatagacgccaaattcaagcaggtgaagaag
gagctggaacagcttaaagaagaatgctttttggaaaaacctttacatttttccagtaag
tccatcagtatagactatttttccctgcacaggtacgaggatgctctcgaagacattctg
gcgggccgtatttattaccgtcgcgagatagagcgacgtttgaaggagcggggaattgaa
ctagataacttggatgttttgcttcatctttcgaccctgagggggcaagtccagcaggta
ccatcgatcaagatagcggaacctgacaggatggtgtgcaaccggtgtggtcaccacgaa
cgtatcaagaaagcgtactgcaacgtaggcaagagagagtgctatttctgtgaaggctgc
cttatgctaggtgagtctaaaccctgtgaggcactgtacgccgctccggcccgtccccgg
atgcaggagaattatgtgaagagcgtaaggctgaacctggacatcgctttcagcttgcca
cagtatgaggcgtttgaagcactggcacgctttgtacgcaaggatagcttgtcggaggcc
atggtctgggcggccagcggtgcggcccgtcctgaagttgcctacggggctatcagggag
attttgaagcggggaggcagggtgctttttggtataccgcgtaaagagatcatggaggag
atgaactatcgccttacccaggctttccccggggttacagtggccggggtacggggtaag
gtgaccaaggcggtgaaggacccggacatcgttctggcttctgcctatcatgctctcaag
tactaccgcaatttcgacctggtcatcctggacgaagcagaggctttcccgtttcgggct
tgtgatatgctggtgaatgccctgaggcgggctaggaagacagacggcaagtacgtctat
ataacctctacgcctgactcggctatgtatgcccgggcccagcgcggcgaggtcaaggtt
atcatgatacctctgcgggtgcacgggattccgctgccggtgccaaaaatgatagtcgag
aaagatatccagggggaacgcaagattcccgacagcctgtttgggttggtccgggaaact
atcgaagaggacctggcccagctcctagtggtggtgccggaccagggtacttcggcgagg
ataggcgcatttttgcgggagaagttcatggaaatggcgtatggcgatgctgaccggctt
ttgatgtcgaccgggtgccaggacgaggagcagcaacgcaaggtcaacagctgggtgcgg
ggagaattcccaatcctggttacgaccaacctgacccggcgaggggacgtggcccctaac
accaacgttatcgtagtttacgccgataacccgacttttgatgagggtgccctgctccag
cttgccggaagagtggggtggtctgatagttacccgaccgggaaggtatggttcatagcc
tcgcggatgacgcgccccatagagggggctataagaaagattaacctgttgaacgaggag
gcggaaaagaaggggctgctcgaaaccggcgccgtgaagcgcagtgatctgaagtcatga

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