Syntrophothermus lipocalidus: Slip_1990
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Entry
Slip_1990 CDS
T01253
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
slp
Syntrophothermus lipocalidus
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA
PAS_9
Mg_chelatase
PAS_4
PAS
AAA_2
AAA_16
bpMoxR
DAP3
Bac_DnaA
TIP49
HTH_50
AAA_30
AAA_22
MCM
DUF815
AAA_3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ADI02741
UniProt:
D7CPW3
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Position
complement(2035510..2036907)
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AA seq
465 aa
AA seq
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MAGGWLLDGQQLLMDAIMTVPYIAAMIVDKQGYVVFVNRTYLKMLKRTEKETLGKHVSEI
TPNSRTLEVLKTGKAIIGYYWPINGYEGVASSIPLFKKGELVGCLAYSIFLDVWDGKTLM
ENLVNELNVYKKEITSLYASKYTFDAIIGESQALQKVKKLACQVANHPDTTVLITGESGT
GKELLAHSIHSASSRARFPFVKVNCAAIPDNLLEAELFGYGEGAYTGAKKGGKPGKFEVA
NGGTVFLDEVGDMSLAMQGKLLRVLQEKEMERLGDNKPIRVNVRVIAATNRNLEEMVEQG
RFREDLYYRLNVVRIHMPALRHRSGDIPLLVKYLLCKLNKKLKTSVMGVSAPAMERIMKY
SWPGNVRELENVLERALILAEMSGSKTITPEYLVLMNDRANASAVSFGKGLKALTEEFER
QVIARVLEETDYNKMEAAIRLDIDVSSLYRKIKRYGLGIGKGAGV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcggggggatggctattggatggacaacaacttctcatggatgctattatgacggtc
ccttacatagccgcaatgatagtcgacaaacaaggctacgtggtgtttgtcaacaggacc
tatctgaagatgctaaaacgcaccgaaaaagagacattgggcaagcatgtcagtgagatc
acgcctaacagccgcactttagaagttctcaagaccggcaaagctataatcggttactac
tggccgatcaacgggtacgaaggagtcgcttccagcataccgttgtttaaaaaaggcgaa
ctagtcgggtgcctggcctacagcatatttctcgatgtttgggacggcaagaccttaatg
gaaaacctggttaacgaattaaacgtgtataagaaggaaataaccagtttgtacgcatcg
aagtatacgtttgacgccatcatcggtgagtcacaggctttgcagaaggtcaagaaactg
gcttgtcaggtagcaaaccatccggataccacggtgctgattaccggagaaagcggaacc
ggaaaagagttgctggctcactcgattcatagcgcatcaagccgcgccagatttcctttc
gtgaaggtaaactgcgcagccatacctgacaacctgctggaagcggagttatttggttat
ggagaaggggcttataccggggccaaaaaaggaggcaagcccggcaagtttgaggtagct
aatggcggcaccgtttttctggatgaagtaggggacatgtccttggctatgcaggggaaa
ctgctgagggtgttgcaggaaaaagagatggaaaggctgggagacaacaaaccgatacgg
gtgaacgtgagggtcatagctgctaccaatcgcaacctcgaagaaatggtcgaacagggg
aggttccgcgaagacctttactaccggctaaatgttgtaaggatccacatgccggccttg
cgccaccggtctggagatatccctctgttagttaagtatctactgtgtaaactgaacaaa
aagttaaaaacgtcggtgatgggggtatccgcgccggctatggaaaggattatgaagtac
agctggccgggtaacgtgcgtgagctggaaaatgttttggaaagggcgttgattcttgca
gagatgagcgggtccaaaaccataacccctgagtacttagtgctgatgaacgacagggca
aatgcgtctgcggtttcatttgggaaagggctgaaggccctgaccgaggagttcgaacga
caggtaatcgcccgtgtcttggaagagaccgactacaataagatggaggctgccattcgc
ctggatatcgatgtttcttcactttaccgcaagataaaacggtacgggcttgggatcggc
aaaggtgctggggtctaa
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