Syntrophothermus lipocalidus: Slip_2024
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Entry
Slip_2024 CDS
T01253
Name
(GenBank) TRAG family protein
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Slip_2024
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
DUF87
DEAD
Mycobacteriophage_TM
Motif
Other DBs
NCBI-ProteinID:
ADI02771
UniProt:
D7CPZ3
LinkDB
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Position
complement(2064685..2066733)
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AA seq
682 aa
AA seq
DB search
MQRAALVKWLAIGILAITMLMVATMYPYGVLFVLVLAGGAALQPRYGTRAWMPAVLSVGL
AVIFVFMTWSALNFRQEMKQVLSIKPGQSVPVESGPVRVNIGLMLSSTPFDKIPLPEKAG
RAGLLGGVILGAILAVGYRQGTEHGPDRVHGLKVASGAAQKGTSRWAGDADVAKVAEFGP
PKEGKYGGGTIVGKLRGRIVRLQPEKSKPPLPQHACVVAGTGAGKSFSFVIPNVVSAAME
GESVVVTDPKGELACTLGPWLKSKGYKVYLFNLGNPEWSMCWNPVMECQDDEEITAFATA
IVQNAARDNSGYFVMKEIQLLKALIYLLRADFPVEQAHLRSALSLLSWPKEALDRRFSEA
YRVGRLPQVGYEEWCGSVSSNYDNAVSGLTAKLGVVRAESVAKLLSRHEIDLSAIGREKA
VLFCVLPIGAGHLKPVLASFYYFFFRRLYGLAAENGGRLPNPTRFILDEFANVGQIPGFV
EVISTARSLGIKIQFVLQGLKQLQDVYGGPEAIMANCPIQLFLGGDDATTTRYFSSRLGE
AAVYAESERKDVTMPWNRIEIPKRTETIVRRALMEPEELSRMDPMAAVCLVRWCLPMYLQ
KLGWTELPQSKDILSLAVAKLSELQPARPDVVVDLPEIPEGRNDEAPDRDRSFERGSDLN
ADGGIGDFLKSPKDEPENPDYL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagagcagcacttgttaaatggttagcaatcggcatactggcgattacaatgctg
atggtcgcgactatgtacccgtacggagtgctttttgttttggtcttggctgggggagct
gctctgcagcccaggtacgggacaagggcatggatgcctgctgtgctgagtgttggtctg
gcggttatattcgtctttatgacatggtctgcgcttaattttcgccaggaaatgaagcag
gtcctaagcataaaaccagggcagagcgtccctgtagagtcggggcccgtacgggtgaac
atagggctgatgctttcttcgacgccttttgacaagatacccctgcctgagaaggcagga
agggcagggcttctgggaggtgtgatactgggtgctatcctggctgttgggtacagacag
ggaacggagcacgggccggaccgggttcacggcctgaaggtagcgtccggcgcagctcag
aaaggcaccagcaggtgggccggggatgcggacgtggcgaaggtggctgagttcgggcct
cccaaggaagggaaatatggtggaggaactatagtggggaaacttcgtgggagaatagtg
agactacagcctgaaaagtccaagcctccactcccacaacacgcctgtgtggtggccggc
acaggcgctgggaaatcgttcagtttcgtgatcccgaatgtggtgtcggctgcgatggaa
ggagagtcggtggtagtcaccgacccgaagggcgagctggcgtgtaccttggggccgtgg
ctcaagtcaaaggggtataaggtgtatctgtttaacctgggaaatcctgaatggtcgatg
tgctggaacccggtgatggagtgtcaggatgatgaagagatcacagcttttgcaacggct
atagtgcagaacgcggcaagggacaacagtgggtacttcgtaatgaaggagatacagctt
ttgaaagctcttatatacctgctccgtgccgattttcccgttgaacaggcacatctccgg
agcgcgctctccctgctgagctggcccaaagaagccctagaccggcgattcagtgaggcg
tacagggtgggtaggctgcctcaagtcgggtatgaagaatggtgtggttcggtgagctca
aactacgacaacgccgtttctggactcacggccaagctcggggtcgttcgtgcggagtct
gtggcgaagcttctctcccggcacgaaatagacctttcggccatcggcagagagaaggct
gtgctgttttgtgttttaccgattggggcaggacacctgaaacccgtgctggcttcgttc
tactacttcttcttccggcgtctctacgggctggcagctgagaacgggggcaggttgccc
aaccccactaggttcatcttggacgagttcgcgaacgtgggacagataccggggtttgtg
gaagtcatctcgaccgcccgctcgcttgggatcaagatccaattcgtactgcaaggcctg
aagcagctccaggacgtctacggtggccccgaggccataatggcgaactgtcccatccag
cttttcctcggcggggatgacgcgacgacgacccggtacttcagttcccgtcttggtgaa
gcagcggtatatgctgagtccgagcgcaaggacgttaccatgccttggaataggattgag
atacccaaacgtaccgagaccatcgtgaggcgtgccctgatggagcctgaggagctttcc
cgcatggacccgatggctgccgtttgcctggtgcgctggtgcctgcctatgtatttacag
aaactgggatggacggagctgccccagagcaaggatatcctgtccctggctgttgcaaaa
ctatctgagctccaacctgcgcgaccggacgtggtagtggatctcccggaaattccagaa
ggaagaaacgatgaagcgccggaccgggatcgttctttcgagagggggagcgatctcaac
gctgacggcgggataggagactttctcaagtccccgaaagatgaacctgaaaacccagat
tatttgtaa
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