Syntrophothermus lipocalidus: Slip_2324
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Entry
Slip_2324 CDS
T01253
Name
(GenBank) Fibronectin type III domain protein
Organism
slp
Syntrophothermus lipocalidus
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIG
TIG_SUH
RHD_dimer
Ig_J_second
fn3
Motif
Other DBs
NCBI-ProteinID:
ADI03063
UniProt:
D7CK79
LinkDB
All DBs
Position
complement(2343309..2348975)
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AA seq
1888 aa
AA seq
DB search
MRRVGAFFILITFFLSLLFPSSLFAASTISVTDIKNANGTSDVTGGSLVIIDGSGFGAFG
NDCQVTFEFNTVSMNVYRIQTWSDTQITVRAPYYTLGTKETEQVLAVTITTNDGRTYTYT
QKKLTYVHDPFITNVYPYSLITVSGFDQNGRPIIQSTVKRVAVEGAYLKKVSKIRVSAAV
SGNSILYSNLDEDKKEPGYAGGISWDSEGAIYVAWNSLMENNDLIFTAESTAGGLSNAYE
GAQGEMRLSNIGIPEATSFNPSPSALIRGIDIAITGSNFESTPANNVVIIAGGEATVKTV
EQVGMGKKIVVTVPSSADKTQHDLRFKIKDPATGKVKSGAIYAGAVNILPTPGELEILGV
VPNVGTPAGGTEIMVIGRGFNTDTEVLFSSANPKWEGLGANPRLLSSEELPAGYPEDAVV
LKVSTPRSPNNGYYTGPVDVTVRDKNLPDIVKDTLTNGFYYSTQGQALRLTAIMPISGPE
EGGQTVTLTGRSFFRFRSSDPVTSLRYANGRLISADYNSNPYVISGFEPASDNNLVITEK
MNSYLEYTDVVVYRTISVTIGGTPVKITKVTELIQADGQRVQYLEGTTNAHYLDPLVLGE
TVDVVVTVTEEMFTGGQRLVIPEDPAVAERAVLSKSYTYQRVKSVPEITSITPTKGPTAG
GTQVEIEGFDLYQGLSVFFGETKGTVVDIVPGGVEDGRPKAKVSVLAPAHAKRERVDVRV
VNWDGGEDVLEEGFEYISSPTITKVSPAVSSPAGGVFVTVEGKDFMYGSAVKIGNNVVIG
HVYEDETENQRFYTDLIDSLFPGENVTFFDELEIRVMRDAVELAPYDRANGNRIYLEVPP
GEPKEQDFWVINPDGGIALWQNKFQYLESSTQLAPRINTITPNEGNIQGGEVVTINGSNF
RDGALVTFDGQLASAITVSQAGQTITCHTPPGTRSDVWVPVQVINVSANGIGVATVAQGF
RYHAVYTNPTINRFAPTHGTKGTKVVVEGADFVVGAETRVFLGDQLLTAVTSWNSDQQVM
GAVYVKSPELIEFIVPELPSPGEYAIKVINPDTAQAIAAKPFVYQLPTSNPTIEDIDGDQ
KAVNPERGSVYGGTDIVVEGADFREGLELYVGTQLASEVKLELVHFDSGAGIWSKCRVRA
KTPALPAGQTPGPADIMIVNPDGGTARALGAFTYVTPSSSPVITAVQPNKGPAAGTQEVI
IRGRDFRVNRDENNVITDWPVVTFGGIEATVVKDDTLSKSQGTQLKVITPLYSGGGAVDV
TITNPDTGTYTLKKGFTFEVSKPTISSVNPSKFPKSRPSLATITGSGFVVPSEAEGVKWA
GSDVLLSDATGQTFTSLADVTPTGKTTIDGAEYPNIEVLDASRIRVVIPPLSTGQFIGKR
VLRVRNPDGGQADCTVEYVSPVVEPTISSIEPSQGSANGGTNVTITGTNFRDQVEVYFGT
GQATIIEKSENRLVVRTPAYSMPANQTTAAVDVSVINTADQGTAVKPSGFTYVSPELQPT
ITSITPDHGTTLGGTIVVIKGDNFRTGCRVFFGTLEAASVTYDRYDQLTVVTPSHAKGSV
DVSVRNPAPDYGEALKANGFTFEETVAPPPSDFDGELWNRRAIKLFWSASSVPSSYEIYV
NTRSSTNSKQFLVSTDKTEFVFEDIEPGKRYYFWMRTFNQYGCSDFIACKSNPIYVSDDD
VENRPQTAEILQNTTRISREKDDLVIIVGDEISSWSSSYYDVTLDSEQAALKRLRLMIPL
VGVRTNPDVTLRINGDRINLSVPLKVLKTSEMQDFWSRTGEGYAFIYIYPTSTAVLESVK
ANRSGSRPLDGFAVEIGFEAKTRKVQASTLAGSLRVVWQVEGGVGRPTRAEYYSYPRLEW
VNCTDVASSLTGRIEVRVPQPNLFIIFG
NT seq
5667 nt
NT seq
+upstream
nt +downstream
nt
atgagacgggtaggggctttttttatactgatcacgttttttctgtcattgctgttccct
agttcgctctttgcagccagcactataagcgtgactgatattaaaaacgccaacggaacc
agtgacgttacgggcggttccttagtaataatcgacggctcgggcttcggcgctttcggc
aatgattgccaggtgaccttcgagttcaataccgtatccatgaacgtttaccgcattcag
acctggtcagatacccagataaccgtgagggctccttattatactcttgggactaaggaa
acggagcaggtactcgcagttaccatcacaaccaacgacggtcgcacctatacctatacc
cagaagaagctcacctatgtccatgatccctttattactaacgtttacccctacagcctt
atcacagtgagcgggtttgaccagaatggaaggccaatcatacagtctacagtcaagagg
gtagcggttgaaggggcttatttgaagaaggtatcgaagataagggtaagtgcggctgtg
agcggcaattccattttatacagtaacctcgacgaagacaaaaaggaaccaggttatgcg
ggcggtatctcctgggacagcgagggggccatatacgttgcctggaattcgcttatggag
aacaacgacctgatttttaccgcggaaagcacggccggagggctttctaatgcttacgag
ggcgcccagggcgaaatgcggctctccaacatcggtatccccgaggctaccagctttaat
ccgagcccgtcagctctaataaggggcatcgatattgcgattaccggttcgaatttcgaa
agcactcctgctaacaacgttgtcataatcgcaggtggcgaggcgactgttaagacagtg
gagcaggtggggatgggcaaaaagatagtagtcactgtccctagttccgcggacaaaacc
cagcatgacctgcgttttaagataaaggacccggctacagggaaggtaaaatctggggcc
atatatgcaggagcggtgaacattctcccgaccccaggagagctcgagatactcggggta
gttcccaatgtgggtactcctgcggggggtaccgagatcatggttatcgggcgggggttc
aataccgacaccgaggtgttattttcatcggcgaaccccaaatgggaaggtttaggcgcg
aaccccaggctgctttccagcgaggagcttccagccggataccctgaagatgcggttgtt
cttaaggtttcaaccccgcgctcgcctaacaacggctattataccggacctgtggacgtg
accgttcgagacaaaaacctaccggacatcgtcaaagacaccctgaccaacggcttttat
tacagtacccagggccaagctttacggcttactgctattatgccgatcagtggacccgag
gaaggcgggcagaccgtgaccctgactggaaggagctttttccgcttccgttcgagcgac
cctgttacttccctccgctatgctaacggccgacttatttcggccgactacaactcgaac
ccctacgtcatttcagggtttgaaccggcctcggacaataaccttgtaataaccgaaaag
atgaacagctatttggaatatactgacgtagttgtttaccgcaccatctcggtcacgatc
ggcggtacgccagtaaagataaccaaggtcaccgagctcatacaggctgacgggcagagg
gtgcagtatttggaaggtaccaccaacgctcactaccttgatcccttggtcctaggggaa
acggtggacgtagtggtcaccgtaacggaagagatgtttaccggcgggcagcggctggtc
atccccgaggatccggcagtagctgaaagggctgtcttgtcaaaatcttatacctaccag
cgagttaaaagcgtgccagagataacgagcattacacctaccaaaggcccgactgcgggc
ggaacccaggtggagattgaaggcttcgacctttaccaggggctcagcgtctttttcggg
gaaacgaaggggaccgtagtagacattgttcccggaggtgttgaggacgggaggccgaag
gcaaaggtttccgtacttgcacctgcccatgctaagagagagagggtagacgtgcgggtt
gtgaattgggatggtggcgaagatgttctcgaggagggctttgaatacatcagcagcccc
acgattactaaagtcagcccggcggtgagctctcctgccggcggggtttttgtgactgtt
gaaggcaaagactttatgtacgggtcggcggtgaaaatcggaaataatgtggtaataggt
cacgtttacgaggacgagacagaaaaccagcgcttctataccgaccttatcgatagcctt
tttcctggtgaaaacgttaccttctttgatgaactcgaaatcagggtaatgcgggacgcg
gtagagcttgccccctacgaccgtgcgaatggcaaccgcatatacctggaggtaccgccg
ggagagccgaaagaacaggacttttgggtcatcaacccggatggcgggatagctctgtgg
cagaacaagttccaataccttgaatccagcacccagctggcccccaggatcaacactata
accccgaatgaagggaacatccaggggggggaagttgtaactataaacggcagcaacttc
agagacggggctctagtaacctttgacgggcagttggccagtgcgattacggtaagccag
gcagggcagaccatcacctgtcacacccccccgggtacgcggagcgacgtttgggtgccg
gtgcaggtgataaacgtttccgccaacggtataggggttgcgactgttgctcaagggttc
aggtaccacgcggtttacaccaacccgactataaacaggtttgcgccgacgcacggcacg
aaagggacaaaagttgtggttgaaggggctgactttgttgtcggagccgaaacaagggta
tttcttggggaccagcttttgacagctgttacatcgtggaatagcgaccagcaggtaatg
ggggcagtgtatgtaaagagtcctgaacttatcgagttcatcgttccggaactgccctct
cctggcgagtacgccatcaaggtgattaatccggatacggcccaagccatcgctgctaag
ccgtttgtgtatcagcttcctaccagtaacccgactatcgaggatatagatggggaccaa
aaggcggttaatcccgagcggggctcagtatacggcggtactgacatagtggtagagggg
gctgattttagggaagggctcgagctttatgtaggaacccagttagccagcgaagtaaag
ctcgaattggtacatttcgacagcggggctgggatttggagcaagtgtcgggtccgggcc
aagacgcctgctcttcctgcagggcagaccccaggaccggcagacatcatgatcgtcaac
ccagacgggggaactgctcgtgcgttgggggcgttcacctatgttacgccttccagcagc
ccggtcataaccgcagttcagcctaataaaggaccagcggccggaactcaggaagtaata
attcgcgggcgtgatttcagggtgaacagagatgagaacaatgtaattacggattggccc
gtggtaaccttcggaggaatagaggcaactgtggtcaaggacgatactctatccaagagc
cagggtacccaactgaaggtaataaccccgctatattcagggggcggggcggtcgacgta
accattaccaatcccgataccgggacctatacgctgaagaagggcttcaccttcgaagtg
agcaaacccaccatcagcagtgtgaacccgtctaagtttccaaagagcaggcctagcctg
gcgacgatcacgggtagcggttttgtggttccatctgaagcggagggggtaaagtgggcc
ggtagcgatgttcttttgagcgatgccaccgggcagacattcacttcgctcgccgatgta
actcctaccggcaagacgactatcgacggggcggaatacccgaacatcgaagtcctggat
gcgtcccgtataagggtagtaattcctcctttgagcacaggccagttcataggaaaacgg
gtactgcgggtccgtaacccggacgggggacaggcggactgcacggtagagtatgtatca
ccggtagtagagccgacgataagctcaatcgagccatctcaggggagcgctaacggtggc
accaacgtgactataaccggtaccaacttccgggatcaggtcgaggtatactttgggacc
ggccaagctaccattatcgaaaagtctgaaaacagactggtggtgcgtactccggcttac
agcatgcctgccaaccagaccacggcagcggtggatgtatcggtaatcaacacagccgac
caggggacggcggtaaaaccgtcagggttcacctacgtatctcctgagctgcagccaacg
ataaccagcattaccccagatcacggaacaaccctgggaggtacgattgtagtaataaag
ggagacaacttccgcaccggatgcagggtattcttcggaacgttggaagcggcttcagta
acttatgaccggtacgaccagcttacggtagtgactccctcacatgccaaggggtccgtg
gacgtgtcggtgcgcaacccagctcccgactacggcgaggccctgaaggccaacggtttt
actttcgaggaaacggtagctcctccgccgtcggatttcgacggggaattgtggaaccgg
cgcgctatcaagcttttctggtcggcgagttcggtgccgagtagttacgagatatatgta
aacacccgttccagcaccaactccaaacagttcctggtttctactgacaaaaccgagttc
gtgttcgaggacatcgagcccggcaagcgctattatttctggatgaggaccttcaaccag
tacggctgttccgatttcatcgcttgcaaatcgaatcccatttacgtttccgacgatgat
gtcgagaaccgcccacaaacggccgaaatattacagaacacaactaggatcagccgggag
aaagatgacctggttataatcgtgggggacgagatttcgtcctggtcaagcagctactac
gacgtcaccttagactctgagcaggcagccctaaaacggctgcggctgatgatccccttg
gtcggggttagaacgaaccctgatgtaactctgaggattaacggggacaggataaacctg
tccgtacctctgaaagtattaaagacatcggaaatgcaggacttttggagccgaacggga
gaaggttacgccttcatctacatctatcccacaagtacggcggttttggaatcggttaag
gccaatcggtcaggttcgagacctcttgatgggttcgccgtcgagatcggattcgaggcc
aaaaccaggaaagttcaggcctcaaccctggcaggcagcctgcgggtggtctggcaggtg
gaaggcggggtcggtcgcccgacgcgggcggagtattactcgtacccgcgtctcgagtgg
gtgaactgcacggatgtggcaagcagcctaaccggcaggatagaagtgcgggtgccgcag
ccgaaccttttcatcatttttgggtaa
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