Serratia liquefaciens: M495_01800
Help
Entry
M495_01800 CDS
T02740
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slq
Serratia liquefaciens
Pathway
slq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M495_01800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slq03019
]
M495_01800
03016 Transfer RNA biogenesis [BR:
slq03016
]
M495_01800
Enzymes [BR:
slq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M495_01800
Messenger RNA biogenesis [BR:
slq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M495_01800
Transfer RNA biogenesis [BR:
slq03016
]
Prokaryotic type
tRNA degradation factors
M495_01800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
S1_RRP5
aRib
KH_2
KH-I_KHDC4-BBP
DUF4172
KH_SLS1_2
UPF0181
Motif
Other DBs
NCBI-ProteinID:
AGQ29212
LinkDB
All DBs
Position
389616..391733
Genome browser
AA seq
705 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINSQYVLNPTTDELKESSLDLVVA
GTAGAVLMVESEADVLSEDQMLGAVVFGHEQQQIVIENINSLVAEAGKPKWDWQAPAVNE
ALHARVAELAEGRLGDAYHITEKQERYAQVDAIKNSVVETLLAQDETLDASEIQDILGSV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKAED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEQDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTIRINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKFAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATAPEAGSPAPEAE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgatcattcgcaaattccagtatggccagcataccgtcactattgagacc
ggtatgatggctcgtcaagccaccgccgccgtgatggtgagcatggatgacaccgccgta
ttcgttaccgtagttggccagaaaaaagccaaaccaggccagagcttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaactctgacttcccgcctgattgaccgtccgatccgt
ccactgttcccggacagcttcctgaacgaagttcaggtgatcgcgaccgttgtttccgta
aacccgcaggttaacccggacatcgttgcgatgatcggtgcctctgcagccctgagcctg
tccggtattccgttcaatggcccaatcggtgctgctcgcgtgggttacatcaacagccag
tacgtgctgaacccaacgactgacgagctgaaagaaagcagcctggacttggtggttgcc
ggtaccgcaggtgcagtgctgatggttgaatccgaagctgacgttctgagcgaagatcaa
atgctgggcgcggtggtctttggccacgagcaacagcagatcgttatcgagaacatcaat
tccctggttgccgaagccggcaagcctaagtgggattggcaggcacctgcagtcaacgaa
gcgctgcacgcgcgcgttgcagaactggcagaaggccgcctgggcgacgcttatcacatc
accgaaaaacaagagcgttacgctcaggtagatgcgatcaagaacagcgttgttgaaacc
ctgttggcgcaggacgaaaccctggacgcgtctgaaattcaggacatcctgggcagcgtt
gagaaaaacgtcgttcgtagtcgcgtgctgcgtggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtgcgcaccggcgtactgccgcgtacccacggttcc
gcactgttcacccgtggtgaaactcaggctctggttactgcaactctgggtaccgcacgt
gatgcgcagaacctggatgagctgatgggcgagaagaccgacagcttcctgttccactac
aacttccctccgtactccgttggtgagactgggatggtaggttcgcctaaacgtcgtgaa
attggtcacggtcgcctggcgaaacgcggcgtattggctatgatgcctaaagcagaagat
ttcccgtacacggtgcgtgtggtttccgaaatcaccgaatccaacggttcttcttctatg
gcttcagtctgtggcgcttctttggcgctgatggacgctggtgtgccaatcaaagccgcc
gttgcgggtatcgcaatgggcctggtgaaagaacaagacaactttgtggttctgtccgac
attctgggtgacgaagatcacctgggcgacatggacttcaaagtagcgggtagccgtgac
ggtattaccgcgctgcagatggacattaaaattgaaggcatcacccgcgaaatcatgcag
gttgcactgaaccaggccaagggcgcgcgtctgcacatcctgggcgtaatggaacaggct
atcagcactccgcgtggcgatatctctcagttcgcaccacgtattcacactatccgaatc
aacccggacaagatcaaagacgtgattggtaaaggcggctctgtcatccgtgcgttgacc
gaagagaccggcactaccatcgaaatcgaagatgatggtacagtgaaaatcgctgctacc
gacggtgagaaagcgaaattcgctattcgccgcatcgaagagatcactgccgagatcgaa
gtgggccgtatttaccagggtaaagttacccgtatcgttgatttcggcgcattcgtggcg
atcggtggtggtaaagaaggtctggtgcacatctctcaaatcgcagacaagcgcgttgag
aaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtactggaagttgac
cgtcagggccgcgtgcgtctgagcatcaaagaagcgaccgcaccagaagcaggttcacct
gcgcctgaagcagaataa
DBGET
integrated database retrieval system
