Serratia liquefaciens: M495_05975
Help
Entry
M495_05975 CDS
T02740
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
slq
Serratia liquefaciens
Pathway
slq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M495_05975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slq03400
]
M495_05975
DNA repair and recombination proteins [BR:
slq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M495_05975
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M495_05975
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
SBDS_domain_II
AAA_22
Tea_C
DUF4686
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
AGQ30002
LinkDB
All DBs
Position
1277532..1279544
Genome browser
AA seq
670 aa
AA seq
DB search
MSKTFKLHSEFKPAGDQPEAIRKLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRAILRRLAELQ
YSRNDQAFQRATFRVRGEVIDVFPAESDELALRIELFDEEVERLSLFDPLTGQIEQEVQR
FTIYPKSHYVTPRERILQAMEEIKVDLAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGEGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGKYELEKSGGDIIDQVVRPTGLLD
PQIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDKITDSMARAIGETERRRAKQQAFNEENGIVPQGLNKKISDILQLG
KPSTRSKGKGKGKAAENAAQYQNLTPKALDQKIRELEAQMYTHAQNLEFEQAAGLRDEIH
QLREQFIAIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgttcaaactgcattccgaattcaagccggccggcgaccagccggaagcc
atccgtaagctggaagagggccttgaagacggcctggctcaccaaacgctgctgggcgta
accggctcgggcaagacattcaccgtcgctaatgtgatcgccgatctcaaccggcccacc
atggtgctggcgcctaataaaactttggcggcgcagctgtatggtgagatgaaagagttc
tttcccgagaatgcggtcgagtatttcgtttcttactacgactactatcagccggaggcc
tacgtccccagctccgacacctttatcgaaaaagacgcctcggtgaatgaacacatcgag
cagatgcgcctttccgcgacgaaagcgctgttggaacgtcgcgatgtgatcgtggtggcg
tcggtatcggcgatctacggcttgggcgatccggatttgtacctgaagatgatgctgcac
ctgaccaaaggcatgatcatcgatcagcgggcgatcctgcgccgtttggcggagctgcaa
tatagccgcaacgatcaggctttccagcgcgcgacgttccgcgtgcggggtgaagtgatt
gacgtcttcccggccgaatcggatgaattggcgctgcgcatcgagctgtttgacgaagag
gtcgaacggctttcgctgtttgatcccctgaccggccagatcgaacaagaagtgcagcgc
tttaccatttaccccaaatcgcactatgtgacgccgcgtgagcggatcctgcaggcgatg
gaagagatcaaggtggatctggccgagcggcgcaaggtgctgttggccaataacaagctg
ctggaagaacagcgtctgacgcagcgcacccagtttgatctggagatgatgaacgaactg
ggctactgctccggcattgaaaactattcgcgctacctgtccggacgcggcgagggtgag
ccaccgccaacgctgttcgactatttgccggcagatggtctgctggtggttgacgagtcc
cacgtgaccattccgcaaatcggcggtatgtacaaaggcgaccgttcacgcaaggaaacg
ctggtggaatacggtttccgcctgccgtcggcgctggataaccgcccgctgcgctttgaa
gagttcgaagcgctggcgccacagactatctatgtgtctgctacgccgggcaaatacgag
ctggaaaaatccggtggtgacattatcgatcaggtggtgcgcccaaccgggctgctggat
ccgcaaatcgaagtgcggccggtgaccacccaggtggacgatctgctttccgaaatccgc
aagcgggtggcgatcaacgagcgtgtgctggttaccacgctgaccaaacgcatggcggaa
gatctgaccgaatacctggaagagcatggcgagcgggtgcgctacctgcactcggacatc
gataccgtggaacgggtcgaaatcattcgtgacctgcgcctgggcgagtttgacgtgctg
gtgggtatcaacctgttgcgtgaagggctggacatgccagaggtgtcgctggtggcgatt
ttggatgccgataaagagggcttcctgcgttccgaacgttcattgatccagaccattggg
cgtgcggcgcgtaacctcaacggtaaagctatcctctacggtgacaaaattaccgactcg
atggccagagcgatcggcgagaccgagcgtcgccgtgccaaacagcaggcgttcaacgaa
gaaaacggcattgtaccgcagggcttgaacaagaaaatttctgatattttgcagttgggc
aaacccagtacccgcagcaaaggcaaagggaaggggaaagctgcggaaaacgccgcccag
taccaaaatcttacgccaaaagcgctggatcagaagattcgcgagttggaagcgcagatg
tatacccacgcgcaaaacctggagttcgagcaggcggcgggcttgcgtgacgaaatccac
cagctgcgcgagcagtttattgccatttcataa
DBGET
integrated database retrieval system
