Serratia liquefaciens: M495_06045
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Entry
M495_06045 CDS
T02740
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
slq
Serratia liquefaciens
Pathway
slq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M495_06045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slq03019
]
M495_06045
Enzymes [BR:
slq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M495_06045
Messenger RNA biogenesis [BR:
slq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M495_06045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
UvrD-helicase
Shikimate_DH
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AGQ30016
LinkDB
All DBs
Position
1291083..1292444
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AA seq
453 aa
AA seq
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MSFETLGLSAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSKHDHPVKGRRPVRALILTPTRELAAQIGENVEAYSKYLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQRAVDLSKVEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKGLANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKRELLSQMI
GEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALPGYEPDPSIKAEPIINGRQGGGRGAPRGNGGGQRAGNGGGQRSGNGG
QRENRGGGSARPQGDGKPRSGAPSRRPRSRPAE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaaccctcggcttaagtgctgaaattctgcgcgctgttgaagaacagggc
tatcgcgaacctacgccaattcaacgccaggcgattcctgtcgtattggaaggtcgtgac
ctgatggccagcgcccagaccggtaccggtaaaaccgctggctttaccctgccgctgttg
cagctgctgagtaagcatgaccatccggtcaaaggccgccgtccggtacgcgcgttgatc
ctgacgccaacccgtgagctggcagcgcagatcggcgaaaacgtcgaagcctacagcaaa
tacctgcgcctgcgttcgctggtggtatttggtggtgtgagcatcaacccgcagatgatg
aaactgcgcggcggcgtcgacattctggtggcaacaccgggtcgtctgctggatctggaa
caccaacgcgccgttgacctgtccaaagttgaaattctggtgctggacgaagccgaccgc
atgctggatatgggctttatccatgatatccgccgcgtgctggccaagctgcccgccaag
cgtcagaacctgctgttctctgcgaccttctccgacgatatcaaagggctggccaacaag
ctgttgcacaacccggcatcggttgaagtggcgcgccgcaataccgcgtctgagcagatc
gaacaaagcgtgcacttcgtagacaagaagcgtaagcgggaattgctgtcccagatgatc
ggtgaaggtgactggaagcaggtgctggtgttcaaccgcaccaagcacggtgctaaccac
ctggccgaacagttgaacaaagacggcattacggccgctgcgattcacggcaataaaagc
cagggcgctcgtacccgtgcgttggccgattttaaagacggcaaaattcgcgtattggtt
gctaccgacatcgcggcgcgtggtctggacatcgaccagttgccacacgtggtgaactac
gaactgcctaacgtaccagaagactacgtacaccgtatcggtcgtaccggtcgtgcagaa
cgtaccggtgaggctatctcactggtgtgcgtggatgaacacaagctgctgcgtgatatc
gaacgcctgctcaagcgtgaaatcccacgtattgccctgccaggctacgagccggatcca
agcatcaaggcggagccgatcattaacggccgtcagggtggtggacgtggtgcgccgcgc
ggcaacggcggtggtcaacgcgccggtaacggtggcggccagcgcagtggcaacggcggc
cagcgtgaaaaccgcggtggcggcagcgcccgcccacagggtgatggcaaaccgcgttca
ggcgcaccttcgcgtcgtccgcgtagccgtccggccgagtaa
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