KEGG   Serratia liquefaciens: M495_08310
Entry
M495_08310        CDS       T02740                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
slq  Serratia liquefaciens
Brite
KEGG Orthology (KO) [BR:slq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slq03400]
    M495_08310 (helD)
Enzymes [BR:slq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M495_08310 (helD)
DNA repair and recombination proteins [BR:slq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    M495_08310 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD ResIII AAA_11
Other DBs
NCBI-ProteinID: AGQ30457
LinkDB
Position
1787112..1789166
AA seq 684 aa
MELKATSLGKHLAQHPYNRVRLLHAGVEVSGEKHEYLIPFNQLIQVRCKRGIVWGELEFE
LPDEKVVRLHGTEWQETQRFYHYLQQAWQQWSAEMSEVSAGVLQQQVEHIQRIEQQDKWF
KKSELGKLQQQIRQSFGALPMPVARLEEFDNCREDYQLCRQWLQHGLHSVEQRNRQWTER
MLETHHDFFQNIESSPLNDSQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRQEAE
PGQILLLAFGRQAAEEMNERIQERLGGVAIQAKTFHALALQIIQQGNRKVPAISKLETDS
KARRALLITHWQQQCAEKKAQAKGWRQWLIEELEWEVPEGDFWQDKRLAERLAGRLERWL
GLMRMHGGSQAEMIEQADEEIRDLFSKRIRLMAPLLKAWKGALKEEGAVDFSGLIHQAVN
ILEKGRFVSPWKHILVDEFQDISPQRAQLLAALRKQNKQTCLFAVGDDWQAIYRFSGAEL
TLTTAFAENFGEGAQCALDTTYRFNDRIGEIANRFVQQNPHQLKKPLNSLSKGNKKSVIL
LPNEQLENLLDKLSGYAKPDERILVLARYHHLKPQALAKAATRWPKLTLEFMTIHASKGQ
QAEYVIIAGLHQGSDGFPAVARESVLEDVLLPQPEDFPDAEERRLLYVALTRAKHQVWLL
QDRERPSVFVEQLQDLGVPAQKKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcgctggggaaacacctggctcagcatccttataaccgcgtg
cggttgctgcacgccggggtcgaggtgagcggtgaaaagcatgaataccttattcctttc
aatcagttgattcaggtcagatgcaagcgcggcatcgtctggggcgagctggagtttgag
ctgccggatgaaaaagtggtacgcctgcacgggactgaatggcaggaaactcagcgtttc
tatcattacctccagcaggcctggcagcaatggagcgctgagatgagcgaggtcagcgcc
ggcgttttgcagcaacaggtcgaacatattcagcgaattgagcaacaggataagtggttc
aagaaatccgaactgggcaagttgcagcaacagattcgccagtctttcggtgctttgccc
atgccggttgcacggctggaggaatttgacaactgtcgggaagattatcaactctgccgc
caatggctgcagcacgggttgcacagcgtggagcagcgtaaccggcagtggaccgaacgg
atgctggagacgcatcatgatttcttccagaacatcgaaagctcaccgctgaacgactcg
caaagtcgcgccgtagttaacggtgaagactcggtattggtattggccggagcaggcagc
ggaaaaacctcggtattggtagcgcgcgcgggttggctattgcgtcgtcaggaggccgaa
cccgggcaaatactgctgctggcattcggtcgccaggcggcggaagagatgaacgaacgc
attcaggaacggctgggcggcgtggctatccaggccaaaaccttccatgcactggcacta
cagattatccaacagggcaaccgcaaggtgccggcgatcagtaagctggaaaccgacagc
aaggctcgccgggctttgctgattacccattggcagcagcagtgcgcagagaaaaaagcc
caggctaaaggctggcgccaatggttgattgaagagttggaatgggaagtgcccgaaggc
gatttttggcaggacaagcgcctggcggagcggttggccggcagactcgaacgctggttg
ggcctgatgcgcatgcacggcggtagccaggcagaaatgatcgaacaggcggatgaagaa
attcgtgacctgttctcaaaacgcattcgcttaatggctcctttgctcaaggcctggaaa
ggggcgttgaaagaggaaggggcggtggacttctcaggcctgatccaccaggcggtcaat
atcttggagaaaggtcggttcgtcagcccgtggaaacacatcctggtggacgagtttcag
gacatttcaccccagcgtgcgcaattactggcggcgttgcgtaaacaaaataaacaaacc
tgcctgtttgcggtaggtgacgactggcaggccatttaccgcttcagcggggccgagctg
acgttgaccaccgcctttgccgagaactttggcgaaggtgcccagtgtgcgcttgatacc
acttaccgtttcaatgatcgtatcggcgagatcgcgaaccgttttgtgcaacagaacccg
catcagctgaaaaaaccgttgaacagcctgagcaagggtaataagaaatcggtgatttta
ttaccgaatgagcagcttgaaaatctgttggacaagctgagcggttatgccaagccggat
gagcgaattctggtgctggcacgctatcaccatttgaaaccgcaggcgctggcaaaagcg
gcgacccgttggccaaaactgaccctcgagtttatgaccattcacgccagtaaagggcag
caggcggagtacgtgatcatcgccggtttgcaccaaggcagcgacggttttccggcggtc
gcgcgtgagtcggtattggaggatgttttgttgccgcagccggaagatttcccggatgcc
gaagagcggcgactgctgtatgtagcgctgactcgcgccaagcatcaggtctggttactg
caggatcgtgaacgtccgtcggtcttcgttgaacaactgcaggatctcggcgttcctgct
cagaagaagccttaa

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