Serratia liquefaciens: M495_16640
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Entry
M495_16640 CDS
T02740
Name
(GenBank) hypothetical protein
KO
K19789
DNA repair protein RadD
Organism
slq
Serratia liquefaciens
Brite
KEGG Orthology (KO) [BR:
slq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slq03400
]
M495_16640
DNA repair and recombination proteins [BR:
slq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
M495_16640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
DUF7577
AAA_16
zf-tcix
Zn_Ribbon_1
Zn_ribbon_3
SLFN-g3_helicase
AAA_22
AAA
DZR
Motif
Other DBs
NCBI-ProteinID:
AGQ32030
LinkDB
All DBs
Position
3466198..3467955
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AA seq
585 aa
AA seq
DB search
MAFTLRPYQLEAVEATIKHFRQHPQPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYRAYGLEADIFAAGLQQKDSAGKVVFGSVQSVARNLSLFDGAFSLLIIDECH
RISDDDESQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDASSLFRD
CIYELPLRYMIKNGYLVPPERLDMPIVQYDFSRLEARSNGLFSEVDLNRELKQQNRITPH
IISQIVEYAETRKGVMIFASTVEHAREVHGLLPSGEAALVSAETPAAERDALIEAFKQQQ
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHSDSQPVQVFCPGCGFANLFWGKCTENGDIIEHYGRRCQGWLEDDEG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDEKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWQNA
ADVLAQQALLRHPDFVVARKRGQFWQVREKVFDYQGRFRRANELY
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttactctgcgcccctaccaactggaagcggtcgaagccaccattaaacatttc
cgtcagcacccgcagccggcgctgattgtgctgccgaccggcgccggtaaaagcctggtg
atcgccgagctggcgaagcgcgcgcgcggcagggtcctggtgttggcccacgtgaaagaa
ctggtggcgcaaaaccacgccaaatatcgcgcttacggactggaggcggatatctttgcc
gccggtctgcagcaaaaagacagcgccggtaaggtggtatttggcagcgttcaatcggtg
gcgcgcaatctgtcgctgttcgacggcgcattttccctgctgatcatcgacgaatgccac
cgcatcagtgacgacgacgaaagccagtaccaacagattattcagcatctgcagaaaacc
aacccacagctgcggctgctgggactgaccgccaccccgtaccggctgggaaaaggctgg
atttatcagtatcactatcacggctttacccgcggcgatgccagcagcctgttccgcgac
tgcatttatgagctgccgctgcgttacatgatcaagaacggctatttggtgccgccggaa
cggctggacatgccgattgtgcagtatgacttcagccgtctggaggccagaagcaatggc
ctgttcagcgaggtggacctgaaccgcgaactgaagcagcaaaatcgcatcactccgcat
atcatcagccaaatcgtggaatacgccgaaacgcgtaagggggtgatgattttcgcctcc
accgttgagcacgcccgtgaagttcacggcctgttgccgtcaggcgaggccgcgttggtc
agtgcagaaacccctgccgccgagcgcgatgccctgattgaagcgttcaaacagcagcaa
ttgcgctatctggtgaatgtggcggtactgaccaccggttttgatgcaccgcacgttgat
ctgatcgccatcctgcgcccaacagagtccgttagcctatatcaacaaatcgtcggccgc
gggctgcggctggcccccggcaaagaggattgtctgatcctcgactacgccgggaacccg
cacgacctgttcacgccggaggtgggggtcagcaagccgcacagcgatagccaacctgtg
caggtattttgtcccggctgcggcttcgccaacctgttctggggcaagtgcaccgagaat
ggcgatatcattgaacattatggtcgccgctgtcagggttggctggaggacgatgaaggc
catcgcgagcagtgcgattaccgttttcgtttcaaaagctgcccgcactgcggtgcggag
aacgacattgccgctcgccgctgccatcagtgtcaggaggtgctggtcgatcccgacgat
atgctgaaggcggcgctgaagctgaaagacgctctggtattacgctgtggcggcatggag
ttgcaaagcggccgcgatgaaaaaggcgagtggctaaaggcgacctattacgacgaagat
ggcaccagcaccagcgaacgttttcgtttgcaaacgccggcgcagcgcaaagcctttgaa
atgctgttcctgcgcccacatcagcgtgcgcctggggtgccgttcgcttggcaaaatgcc
gccgacgtgctggctcagcaagcgctgctgcgtcatccggattttgttgtggcgcgcaaa
cgcgggcaattctggcaggtacgagaaaaagtgttcgattatcaaggacgcttccgccgc
gccaatgagctgtactga
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